Gene MCA2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2230 
Symbol 
ID3102334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp2419226 
End bp2420314 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content47% 
IMG OID637171375 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_114649 
Protein GI53803744 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA CATCGCCTAT ATACATCATC CTCATTGCCA TGTCGTTGCT TGCCTGCCAG 
GAGACTGACA ACGAAACGCG CCAGGAAACT CCAAAATACG AAGCAACCAC CCCATTTCGC 
AAAGACATAT CAATAAAAAA GGAATATGTA TGTCAGATAC ACGGCATCAG ACATATCGAG 
GTGAGAGCCA TGGAAAAAGG CTACCTGCAA GACATATATG TCGATGAGGG GCAGTTGGTA 
CATCAGGGCC AGCCGATGTT CAAAATCATG CCAGCCATCT ATCTAGCAGA ACTGATGAAG 
GCGCAAGCCG AAGCCAACAT CATGAATATC GAATACAAAA ACACCAAAGG CCTGGCCGAC 
CAGAATATCG TATCGCAGAA CGAACTCGCT CTGGCCAAAG CCAAGCTGGA CAAGGCCAAT 
GCCGAAGTAA AACTGGCAGA GACTCATTTG AGTTTCACCG CGATTAACGC CCCATTCGAT 
GGAATCGTCG ATCATCTCCT GGCCAGAAAT GGCAGCCTTT TGGACGAAGG AACACTATTA 
ACCACGCTCT CCGATATCAG CAAGTTATGG GTCTATTTCA ACGTACCCGA ATCTGAATAT 
CTCGACTACA AAACCAATAA CAAAGACGAC CAGACATACT CGAAAGTCAA GCTGAAAATG 
GCGAATGGCG CGATTTTCGA TCAGGAAGGC AAGATCGAAA CGATAGAAGC AGATTTCGAC 
AACACCGCTG GCAACATCGA GTTCAGGGCG ACTTTTCCGA ATCCCAACGG TCTCCTCAGA 
CATGGAGAAA CCGGAACCAT CATAATGAAA AAGCCATACA AAAACGCTTT GCTCATCCCC 
CAAAAAGCCA CCTTCGAAGT CCTGGACAAG ATGTTTGTCT ACGTCATCAA CAATGAAGGC 
GTCGTCGAAC AGAGGCAGAT CACGATTGAC GCAGAAATCC CATATTTCTT TCTGGTAAAG 
CAAGGCGTCA AAGATGACGA CAAGATCTTG ATCGAGGGCT TGCGTAAAGT ACATCCTGGC 
GACCATCTGG ACATCACCTT GATTCCAACA GAAAAGCTAC AGTCAAATCT GCAGCTCCAT 
GCCGAATAA
 
Protein sequence
MNATSPIYII LIAMSLLACQ ETDNETRQET PKYEATTPFR KDISIKKEYV CQIHGIRHIE 
VRAMEKGYLQ DIYVDEGQLV HQGQPMFKIM PAIYLAELMK AQAEANIMNI EYKNTKGLAD 
QNIVSQNELA LAKAKLDKAN AEVKLAETHL SFTAINAPFD GIVDHLLARN GSLLDEGTLL 
TTLSDISKLW VYFNVPESEY LDYKTNNKDD QTYSKVKLKM ANGAIFDQEG KIETIEADFD 
NTAGNIEFRA TFPNPNGLLR HGETGTIIMK KPYKNALLIP QKATFEVLDK MFVYVINNEG 
VVEQRQITID AEIPYFFLVK QGVKDDDKIL IEGLRKVHPG DHLDITLIPT EKLQSNLQLH 
AE