Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2160 |
Symbol | |
ID | 3102958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2326900 |
End bp | 2330088 |
Gene Length | 3189 bp |
Protein Length | 1062 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637171309 |
Product | cytochrome c5530 family protein |
Protein accession | YP_114583 |
Protein GI | 53803572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.870345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACT CACGCCGACC CCAGTCGTTC ACATCGAGTC GAAATCCGTT TCTTGCCTGT CTGTCGATAT GTTTTGCCCT GGCGCTTGCG CCGGAATCGG TGCTGGCGGC AGCCAAACTG AAGATCGCCA AGGCGTCATG GTCGGAGAAG ACGGGAATTC TGACCGTCAA GGGCAGCCTC AAAAACTCTG CAGGGCCGGT AGAAATCTAT GACATCAACG GTCGCCGCTT GGTTGCGATC GGCGACAGCA GACAGGGAGG CGCCTTCGGA GCCAGCATAA GCCGTGACGC GCTTGCCGCG GTGCCCTGCG CGGTACGGGT CCAGTCCGGC GACGGCGAGG CCATCAAGGT GGTGAAGGGG GCACCCAAGT CATGCAGCGG CGTTCCGACC TGCAGCATCG TCAGTCCGGT CGACGGCACA GCCCTTCAGA TGGGCATAGA AACCCACTTT GAAGCCAACG CCACGGCCAG GGATCCGGCT GCCTTGCCGC TCAAGTACGA GTGGGATTTC GGCGGCGGCG CCATGGGCTT CCCTGCCGGC ACACTGGTCC AATCCGGCTC GGTCGGCGAA CACGCGACTT TTGTCCGCGA TCATGGCATT TATCGGGTCC GCTTCGTAGT GACCGACGCA TTGGGGCGCC GATGCGAAGA TTCGATAGCC GTCAGCGTCG GCCAGGCGCC GACCGCTCCG CCGGCAGTGG CGTCCCTCGC GGCGGCCTCG GTGCAGGCAG CCCCCAAATT TGGCAGCGAG CTGGAGGGCA AGGCCGGCGA TGTCGTGGTC CTCCCTTTCG CCCACAGCGC GGCGATGGGG CAGGGCGTCG TGAACCTGGA TGCGGGCAAC CCCTGGCCCG GTTTCTTCCA TCTGAATGCC ATCGCGTACA CCAAGGCGCG CCAGCCCTTG AACGTCGATG CGGACGCCTA TGAACTCTTC TATTCGGCTG CGGTGAATCC AGCCGATCCC GTCGGGGCCG ATTCCATCAA CAGCACCAGC CGGAACTATC CGGTCGGTTC TTCCTTCAGC CAGGCCCAGA TCAGGAAGAC CGACATGTGG GAAGCACAGG AAGGCTGGGA GACCACGGCA GGCTACGAAC CGTTCTGGAC GGTTGATGAG AACACGCCGA CGGTTTCGCC CTTGTGGAAG GACCCGCCCA CCATCACCAA GATATTGAAC GCTGCCTTTC CCGACATGTG GGGGCAAGGC GCCGACTGGA CCTGGTACCT GGCCCGCAAT TCGGTGCCGG ACGAAGGCTA TCTCACCGGC AAGTTCGAGA CCAGGATGAC CGGCAACCCT GGCGACAAGG ATAATTTCAA GGGCGGTCTC ATGCCTGGTA AGGACAATCC TTACCAAGCC AATACGCCGC AGGCGTTCCT GACCCGCGAG GCAGATACCC AAGCCTTCCT GGCACTGGGA ATACCTTTGA CCGATATGGA CGACCAGGGC CGCGTCAATC CCTTCCCTGT GATGCGGGTG GAGGTCAGGA GCAAGTCCAC CGGACAGACT GCCGCGGCCG CGGACGTCGC GCTCAATACC GCCAAGGACG TGCGCTGCAG CGAATGCCAC GTCTATGGTG GCATCGGTGC CGACCCCACC GTCAAACGCT ATCTGCGACC GCAGAAAAAG GACGCGTCGG GCAATCCCGT TTTCGACGGC TACGGCAACA AGGTATTGCT GGCCGGAGAA CAGAATCCGC GAGTGGAATA TTTCCCCGAC TACATGAATT CCAACCCGAA GAGCCTAGAA GAAAAGGAGA ATGAAGCCTT TTGGAACCAG TACGCGATTC ATGCCTTCAT GGAGCTGGAG GACCGAACCG GCGCACTCCT GGACGACTGG GACCCCGATG CTGATGGCGT CGCCGGTGAA GGGAACAGTC ATCCCTGGGA GAACGGCCTG CGCTACATCA AGCAGTTCAA GGTGCCCGAA CCCTGCCAAT GGTGCCACCA ATCCGCCTAT CTGAACGAAT GCGGCTACGG CACCACCAAC TGGGACGGAC TGGAATACGG GCCTTCCGAA CACCGCTTCC ACGGCCGCAT CCAGGTGGAC GGCCAGGGCA AGGTGATCCG CGACGCTCAG GGCCGGCCGC TGATGTGGGA CGACCAGGGA ACGGGCAAGA CCAACCCCAA CTCGCTGTTC CCGGTCGTGG ACAAGCAGGG CAACAAGGTG GCCATGGAGC AGAACTGCCT CAAGTGCCAC GTGGGCGCCA GCCAGAAGGG CTATCACGAC CCCATGTACA GTGCCGGAAT CCAGTGCGCC GACTGCCATG GCGACATGCT GGCCGTGGGC GCCGTGTTCG CCAAGAAAGC CCAGGGCGAC CAGCCGAGGA ACGCCAAGGG CGAACTGGTC GATCCCACCA AGCTCGACGA ACAGGGCAAT CCGACGCCTG TGCATCGGGT CGACTACCTC GATCAGCCGA ACTGCGGGTC CTGCCATACC GGCAATGGAA GCGAACCCGT GCGCAAACTG GCCTACGATG CCGCCGACCC CGCGGCCACG CCGCTGTTGC CGGAGAATCC GCGGTTCGCC GTCAATAGCG CGAAGATTGC GTTCAACTAT CTCGACTGGG ACATGAACCG GGTGGACAAG AGCTACGATC TGCCCTTGTT CCGAAAGAGC CTGGACACCC ATGGCAAGGT GCCATGCGCG GCCTGTCACG GCTCGACCCA TGCCATCTGG CCGATCAAGG AGCCCGGCGC CAACGACAAC GTCACCGCGC TGCAGCTCCA GGGCCACACC GGCACCATCC TGGAATGCAA CGTCTGCCAC ACGGCGGATT CGTTCGCCAG GAAAGAGGAT CTGGACGGCG GCCAGTACAG CGGCGACGCG CAGACCGGCA TCCTCGGCGG ACCGCACGAC ATGCACCCGG TCAACGACCC GTACTGGTGG AAAGGCGCCC AGGGCGACGG AGCCAACAGT GACGGCACCG CCTACGGCGG CTGGCACAAC GACTACGCCA AGCTGCCGGG GATGAAGGGT GAAGACCAGT GCGCGGCCTG CCACGGCAAC GACCACAAGG GCACGCGTCT GTCGAAGACG CCGGTGGACC GGGTGTTCGA CTTCCGGGGC TTCGACGGCA AGAAGCTGAA GAAGGCCGGG TTCAAGACCA AGGTCGTGAA AGTGGCCGCC GGCACGCCGA TCGGCTGCGA TACCTGCCAC AGTCTCCAGA CCAGCTTCAA GGGGGCGCCA GGACACTGA
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Protein sequence | MNNSRRPQSF TSSRNPFLAC LSICFALALA PESVLAAAKL KIAKASWSEK TGILTVKGSL KNSAGPVEIY DINGRRLVAI GDSRQGGAFG ASISRDALAA VPCAVRVQSG DGEAIKVVKG APKSCSGVPT CSIVSPVDGT ALQMGIETHF EANATARDPA ALPLKYEWDF GGGAMGFPAG TLVQSGSVGE HATFVRDHGI YRVRFVVTDA LGRRCEDSIA VSVGQAPTAP PAVASLAAAS VQAAPKFGSE LEGKAGDVVV LPFAHSAAMG QGVVNLDAGN PWPGFFHLNA IAYTKARQPL NVDADAYELF YSAAVNPADP VGADSINSTS RNYPVGSSFS QAQIRKTDMW EAQEGWETTA GYEPFWTVDE NTPTVSPLWK DPPTITKILN AAFPDMWGQG ADWTWYLARN SVPDEGYLTG KFETRMTGNP GDKDNFKGGL MPGKDNPYQA NTPQAFLTRE ADTQAFLALG IPLTDMDDQG RVNPFPVMRV EVRSKSTGQT AAAADVALNT AKDVRCSECH VYGGIGADPT VKRYLRPQKK DASGNPVFDG YGNKVLLAGE QNPRVEYFPD YMNSNPKSLE EKENEAFWNQ YAIHAFMELE DRTGALLDDW DPDADGVAGE GNSHPWENGL RYIKQFKVPE PCQWCHQSAY LNECGYGTTN WDGLEYGPSE HRFHGRIQVD GQGKVIRDAQ GRPLMWDDQG TGKTNPNSLF PVVDKQGNKV AMEQNCLKCH VGASQKGYHD PMYSAGIQCA DCHGDMLAVG AVFAKKAQGD QPRNAKGELV DPTKLDEQGN PTPVHRVDYL DQPNCGSCHT GNGSEPVRKL AYDAADPAAT PLLPENPRFA VNSAKIAFNY LDWDMNRVDK SYDLPLFRKS LDTHGKVPCA ACHGSTHAIW PIKEPGANDN VTALQLQGHT GTILECNVCH TADSFARKED LDGGQYSGDA QTGILGGPHD MHPVNDPYWW KGAQGDGANS DGTAYGGWHN DYAKLPGMKG EDQCAACHGN DHKGTRLSKT PVDRVFDFRG FDGKKLKKAG FKTKVVKVAA GTPIGCDTCH SLQTSFKGAP GH
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