Gene MCA2140 details

Gene Information

• Locus tag: MCA2140
• Symbol: rep
• ID: 3105001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2303018
• End bp: 2305021
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171290
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_114566
• Protein GI: 53803604
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.90387
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGGTC TCAACCCCCA GCAACACGCG GCGGTCACCA CCCTGGACTG TCCGCTGCTC 
GTGATCGCCG GCGCCGGCAG CGGCAAAACC CGCGTCATCA CCGAAAAGAT CGCCTACCTG 
ATCCGGCAGG GCACACCGGC CCGCCATATC GTCGCCGTCA CTTTCACCAA CAAGGCCGCG 
CGCGAGATGA AAAGCCGGGT CGGCAAGCTG GCCGACGACA AGTCACTGCG GGGTCTCACG 
GTCTCCACCT TCCATGCTCT GGGACTGGAG ATCGTCCGGC GCGAACACAA AGCGCTGGAA 
CTCAAGTCCG CCATTTCCAT CTTCGATGAG CAGGACCGGC AGGCTTTGCT GCGGGAACTG 
ATCCGCCACG GCGACCACCG CTTCGACCCG GAGCAAGCCG ACGCCTACGC CGCGCGCATC 
TCGCGCTGGA AAAACCGCTT CATCACCCCC GCCCGTGCCC GCTCGCTCGA CGAACCCGAT 
GCGGCCTGGA TCGCCGCCCT GTATGAAGCC TACATGCACC ACATGAAGGC TTACAACGCC 
GTCGATTTCG ATGACCTGAT CCTGCTGCCG GTGATGCTGT TCCAGCAACA CGCCGAAGTG 
CTGGACAAAT GGCGCAACCA GATCCGCTAC CTGCTGGTCG ACGAATACCA GGACACCAAC 
CAGACCCAGT ACGAACTCAT CAAGCTGCTA ACCGGCACCT TGGGCAAGTT CACCGTGGTC 
GGCGACGACG ACCAGTCCAT CTATGCCTGG CGCGGTGCCC AGCCGGAAAA CCTGGCCCAG 
CTCCGCAACG ACTTCCCCCG CCTCAAGGTC ATCAAACTCG AACAGAATTA CCGCTCCATG 
GGACGCATCC TCAAGGCCGC CAACCAGCTG ATCGGCAACA ATCCGCACAT TTTCGAAAAG 
AAACTGTGGA GCGCCATGGG CCAAGGCGAC CCGATCCGGG TGCTCAGGCA CCGCGACGAA 
ATCGCCGAAG CACGCCAGAT CGCCGCCGAT ATCGTGCATC ACAAATTCCG CCACAACACC 
CGCTTCGCCG ACTATGCCAT CCTCTACCGC GGCAACCACC AGTCGCGGCT GTTCGAGCGC 
GCGCTGCGGG AATTCAGCGT GCCGTATCAC ATCAGCGGCG GCACGTCCTT CTTCGGCTAC 
ACGGAGGTCA AGGACGTCAT GGCCTACCTG CGCCTGCTGG TGAATCCGGA CGACGACGCC 
GCCTTCCTGC GCATCGTCAA CGTCCCGCGC CGCGAGATCG GCCCCACCAC TCTGGAAAAA 
CTCGGCCAGT ACGCCAACCG CCGTCATATC AGCCTGTACG CCGCCTGCTT CGAACTGGGC 
CTGGAACAAT CCCTTCCGGC CAACGCCGTC CAGCGCCTGC GCCGCTTCGG GGAGCACATC 
GCCGATACCG CCGACCGCAC CGCACGCGGA GACGTCTTCG AGATCATCGA CGATTTTCTC 
GGCACGATCG GTTACGAAAA CTGGGTGCGG GAAAACAGCA GTGACGCCAA GGCCGCCGAG 
CGCAAATTCG GCAACGTGCG CGAACTGCTC GACTGGCTCC GGCGCATCGC CGAAAAAGAC 
GGCGAAAACC GCAGCCTGGC CGAAACCGTG GCCAAGGCCA CCCTGCTCGA CGTACTGGAC 
CGCAACCAGG AAGACGACAC CGGCGACCGG GTCAGCCTCA TGACCCTGCA CGCCGCCAAG 
GGGCTGGAAT TTCCCTATGT CTACCTGGTC GGCATGGAGG AAAATCTCCT CCCCCACCAA 
ACCAGCATCG ACGAGGACAA CATCGAAGAA GAGCGCCGCC TCGCCTACGT CGGCATCACC 
CGCGCCCGCC GCGACCTCAC CCTGAGCTAC TGCAGCCACC GGAAGCGTTA CGGCGAAATG 
ATCGGCTGCG AGCCCAGCCG CTTTCTCGCC GAACTGCCGC AGGAAGACCT CGAATGGCCC 
GACCGCCAGC CGCTCGATCC CGAAACCAAG CGTGAACGCG GCCGCGCCTC ACTGGCGCAG 
CTGCGGAATT TGTTAAGCGA CTGA 

 

Protein sequence

MNGLNPQQHA AVTTLDCPLL VIAGAGSGKT RVITEKIAYL IRQGTPARHI VAVTFTNKAA 
REMKSRVGKL ADDKSLRGLT VSTFHALGLE IVRREHKALE LKSAISIFDE QDRQALLREL 
IRHGDHRFDP EQADAYAARI SRWKNRFITP ARARSLDEPD AAWIAALYEA YMHHMKAYNA 
VDFDDLILLP VMLFQQHAEV LDKWRNQIRY LLVDEYQDTN QTQYELIKLL TGTLGKFTVV 
GDDDQSIYAW RGAQPENLAQ LRNDFPRLKV IKLEQNYRSM GRILKAANQL IGNNPHIFEK 
KLWSAMGQGD PIRVLRHRDE IAEARQIAAD IVHHKFRHNT RFADYAILYR GNHQSRLFER 
ALREFSVPYH ISGGTSFFGY TEVKDVMAYL RLLVNPDDDA AFLRIVNVPR REIGPTTLEK 
LGQYANRRHI SLYAACFELG LEQSLPANAV QRLRRFGEHI ADTADRTARG DVFEIIDDFL 
GTIGYENWVR ENSSDAKAAE RKFGNVRELL DWLRRIAEKD GENRSLAETV AKATLLDVLD 
RNQEDDTGDR VSLMTLHAAK GLEFPYVYLV GMEENLLPHQ TSIDEDNIEE ERRLAYVGIT 
RARRDLTLSY CSHRKRYGEM IGCEPSRFLA ELPQEDLEWP DRQPLDPETK RERGRASLAQ 
LRNLLSD