| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2121 |
|---|
| Symbol | |
|---|
| ID | 3102508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2280877 |
|---|
| End bp | 2281641 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637171271 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_114547 |
|---|
| Protein GI | 53803815 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACC GCGTCGCTCT CCAGACCATC CTGTTCAAGG AAATCTACCG GTTCCTGCGG
ATCTGGCCGC AGACCGTGCT GCCGCCCGCG GTGACCACGG GCCTGTATTT CCTGATCTTC
GGCACGGTGG TCGGCGCCCG GATCGGTGAA ATGGGCGGTT TCAGCTACAT CGACTACATC
GTCCCCGGCG TGGTCCTGAT GTCGGTCATC ACCAATTCGT ACATGAACGT GGTGTCTTCG
TTCTATTCCA CCAAGTTCCA GCACAATATC GAGGAATTGC TGGTGGCGCC GGTGCCCGAT
GGAGTGATTC TGGCGGGCTA CGTCGGCGGC GGGGTGATGC GGGGACTGGT AGTCGGCGGG
GTGGTGCTGG CGATCTCGGC GCTGTTCGCG GATTTTCACC CGGTGCATCC CTGGGCGGTG
GCGGCCATGC TCGTGCTGAC CGCGACCTTG TTCTCCCTGG CGGGTTTCCT GAACGCGATA
TTCGCCAACA GCTTCGACGA CATTTCCATC GTCCCGAATT TCGTGCTCAC GCCGCTGGTC
TACCTGGGCG GGGTGTTTTA CTCGATCGAA CTGCTGCCGG ATTTCTGGCG GGAGGCCTCG
CGCTTCAATC CCATCCTGTA CATGATCAAT GCCTTCCGCT ACGGTTTTCT GGGCATTTCC
GACGTTCCGG TGGAGCTGGC CTTCGCCATG GTCGGGATAC TGATCCTGGT TCTGACGCTG
GCAGCCCTGA TCCTGTTGCG GCGAGGGACG GGCCTCAAGA CTTGA
|
|---|
| Protein sequence | MTYRVALQTI LFKEIYRFLR IWPQTVLPPA VTTGLYFLIF GTVVGARIGE MGGFSYIDYI
VPGVVLMSVI TNSYMNVVSS FYSTKFQHNI EELLVAPVPD GVILAGYVGG GVMRGLVVGG
VVLAISALFA DFHPVHPWAV AAMLVLTATL FSLAGFLNAI FANSFDDISI VPNFVLTPLV
YLGGVFYSIE LLPDFWREAS RFNPILYMIN AFRYGFLGIS DVPVELAFAM VGILILVLTL
AALILLRRGT GLKT
|
|---|
| |