Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2097 |
Symbol | valS |
ID | 3103657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2254440 |
End bp | 2257205 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637171251 |
Product | valyl-tRNA synthetase |
Protein accession | YP_114527 |
Protein GI | 53803851 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.694852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAAAG TCTACGAACC CCACGCCATC GAACAGCGCT GGTATCAGCA CTGGGAGGCA TCCGGCTTCT TCGCCCCGGT GGGCGAGGGC GCGCCTTACT GCATCATGAT CCCGCCGCCC AATGTCACCG GCAGCCTGCA CATGGGGCAC GCCTTTCAGG ACACGGTGAT GGATGTCCTC ATCCGGTACC ACCGCATGAA GGGCGACCGC ACCCTCTGGC AGGCCGGTAC CGACCACGCC GGCATCGCCA CCCAGATGGT GGTGGAGCGC CAGCTCGCCG GCGTCGGTCA GACCCGCCAC GATTTGGGCC GCGAGGCGTT CATCGAGCGG GTCTGGCAAT GGAAGGAGAC TTCCGGCGGC ACCATCACCC GTCAGCTCCG CCGCATGGGA GCCTCGCTGG ACTGGTCGCG CGAGCGTTTC ACTCTGGACG AGGGGTTGTC GCGGGCCGTG CGAGAGGTAT TCGTCCGCCT CTACGAGGAG GGACTCATTT ATCGCGGCAA ACGCCTGGTG AACTGGGACC CGGTGCTGCA TACCGCCGTG TCCGATCTGG AAGTGATCTC CGAGGAGGAG CAGGGGCATC TCTGGCACAT GCGCTACCCG CTGGCCGATG GCAGCGGCCA TCTGGTGGTG GCGACCACCC GGCCGGAAAC CATGCTCGGC GACACTGCGG TGGCGGTACA TCCGGAGGAC GAGCGCTACC GCCACCTGAT CGGCCATTCG GTCCGGCTGC CGCTCACCGG CCGCGAGATC CCGGTGATAG GCGACACGTA TGTGGATCCC GAATTCGGCT CTGGCTGTGT CAAGATCACC CCGGCCCATG ACTTCAACGA CTACGCCATC GGCGTGCGCC ATGCCCTGCC GATGATCAGC ATATTCGATC AGGGCGCGGC GATTCTTCCG AGGGCGGATA TTCCCGCCAA GTACCACGGC CTCGACCGCT ACGAGGCGCG CGACCTGGTT GTCCATGATC TCAACGAACT CGGTCTGATC GAGAAGATCG AAGAGCACCG GCTGATGGTG CCGCGCGGGG ACCGTACCGG CGTGGTGGTC GAGCCATTCC TGACCGATCA GTGGTTCGTC AAGGCCGGTC CCCTGGCCGG GCCGGCCATC AAGGCCGTGG AGGAGGGGCG CATCCGCTTC GTGCCGGAAA ACTGGAGCAA CACCTATTAC CAGTGGATGT ACAACATCCA GGACTGGTGC ATCAGCCGGC AGATCTGGTG GGGACACCGC ATTCCGGCCT GGTACGACGG CGAAGGCCGG GTCTACGTTG GCCGTTCCGA GGAGGAAGTC CGCGCGAAGC ATGGCCTCGA TGCGTCCATC CCCCTGCGGC AGGACGAAGA CGTGTTGGAC ACCTGGTTTT CCTCCGCCCT GTGGCCGTTC TCCACCCTGG GCTGGCCCGA GCGCAAGCCG GAACTCGACA CCTTCTATCC CACCAGCGTC CTGGTCACGG GTTTCGACAT CATCTTCTTC TGGGTGGCCC GGATGATCAT GATGGGCCTC AAGTTCATGG GTGACGTACC GTTCCGTGAG GTCTACATCC ATGGGCTGGT GCGCGATGCC GAAGGCCAGA AGATGTCCAA GTCCAAGGGC AACGTGCTGG ACCCCATCGA CCTGATCGAC GGCATCTCGT TGGAGGATCT GGTCGCGAAG AGGACCCAGG GGTTGATGCA GCCGCAGATG GCTGCGCGGA TCGAGAAGCG CACCCGCCAG GACTTCCCCG AGGGCATTCC GTCCTATGGC ACCGACGCAC TGCGCTTCAC CTTCGCCTCG CTGGCGTCCA CCGGCCGCGA CATCCGTTTC GACCTGAAAC GGGTGGAGGG TTGCCGCAAC TTCTGCAACA AGCTGTGGAA CGCGGCGCGT TATGTGCTGA TGAACACCGA AGGGCAGGAT TGCGGCTCGG GCGGCGGCGC CTGCAGCTAC AGTTTGCCGG ACCGCTGGAT CAGGAGCCGG TTCCAAGCCG CCGTCGGCAC TGTCACCGAG GCGATGGGTC AGTACCGCTT CGATCTGGCG GCTCAGGCCC TGTACGAGTT CGTCTGGAAC GAATACTGCG ACTGGTACCT GGAGCTGGCC AAGGTGGTGC TCCAGTCGGG CAACGAGGCC GAACGACGCG GCACCCGCCA GACGCTGGCG GGGGTTCTGG AGTCCCTGCT GCGGCTGGCA CATCCGTTCA TGCCGTTCAT CACCGAGGAG ATCTGGACCC GGGTGGCGCC GCTGACGGGG GCATTCGCGC CCACGATCAT GCGGCAAAGC TATCCTGAAG CCGATCCGGC TCTCGCTGAT CCCGAGGCCG AGCGTGAAAT GGCCTGGGTG ATGGAAGTGA TCCTGGGAGT GCGCCGCATC CGGGCGGAAA TGAACCTCGC TCCGGCCCGG CCGCTGCCGG TGCTGCTGAG TCACGGCACC GGCCAGGACC GGGTCTGGTC GGCACGTTCG GGCCCGCTGC TGGAGAAACT GGCACGGCTG GAAAGCCTGA ACTGGCTCGC GCCGGGCCAG GCCGAACCGG AAGCGGCGAT CGCCCTGGTG GGCGAACTGC GCGTCCTCAT CCCAATGCGG GGCCTGATCG ACAAGGAGGC CGAGCTGACC AGACTGGACA AGGAAATCCA GCGCCTGGAC AAGGAGCTGC CGCGGCTGGA AGGCAAGCTC GGCGATGCCT CTTTCCTGAG CAAGGCGCCG CCGGCGGTGG TGGAAAAAGA GAAGGCCCGT CTGGCCGATC TGCAGGCCGG TCTGGCCTCT CTGGTCGCCC AGAAAGAACG TATTCAGGCG CTGTGA
|
Protein sequence | MDKVYEPHAI EQRWYQHWEA SGFFAPVGEG APYCIMIPPP NVTGSLHMGH AFQDTVMDVL IRYHRMKGDR TLWQAGTDHA GIATQMVVER QLAGVGQTRH DLGREAFIER VWQWKETSGG TITRQLRRMG ASLDWSRERF TLDEGLSRAV REVFVRLYEE GLIYRGKRLV NWDPVLHTAV SDLEVISEEE QGHLWHMRYP LADGSGHLVV ATTRPETMLG DTAVAVHPED ERYRHLIGHS VRLPLTGREI PVIGDTYVDP EFGSGCVKIT PAHDFNDYAI GVRHALPMIS IFDQGAAILP RADIPAKYHG LDRYEARDLV VHDLNELGLI EKIEEHRLMV PRGDRTGVVV EPFLTDQWFV KAGPLAGPAI KAVEEGRIRF VPENWSNTYY QWMYNIQDWC ISRQIWWGHR IPAWYDGEGR VYVGRSEEEV RAKHGLDASI PLRQDEDVLD TWFSSALWPF STLGWPERKP ELDTFYPTSV LVTGFDIIFF WVARMIMMGL KFMGDVPFRE VYIHGLVRDA EGQKMSKSKG NVLDPIDLID GISLEDLVAK RTQGLMQPQM AARIEKRTRQ DFPEGIPSYG TDALRFTFAS LASTGRDIRF DLKRVEGCRN FCNKLWNAAR YVLMNTEGQD CGSGGGACSY SLPDRWIRSR FQAAVGTVTE AMGQYRFDLA AQALYEFVWN EYCDWYLELA KVVLQSGNEA ERRGTRQTLA GVLESLLRLA HPFMPFITEE IWTRVAPLTG AFAPTIMRQS YPEADPALAD PEAEREMAWV MEVILGVRRI RAEMNLAPAR PLPVLLSHGT GQDRVWSARS GPLLEKLARL ESLNWLAPGQ AEPEAAIALV GELRVLIPMR GLIDKEAELT RLDKEIQRLD KELPRLEGKL GDASFLSKAP PAVVEKEKAR LADLQAGLAS LVAQKERIQA L
|
| |