| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2095 |
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| Symbol | pilC |
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| ID | 3104285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2251456 |
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| End bp | 2252670 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637171249 |
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| Product | type IV pilin biogenesis protein PilC |
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| Protein accession | YP_114525 |
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| Protein GI | 53803861 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAACC AGGAAACCGC TTTGTTCGTC TGGGAGGGCC TGGACAGGAA CGGCAGCCGG
ACCCGGGGTG AAATCAGCTC CCGGTCGGAG ATCACGGCGC GCACGGAGCT GAGGCGCCAG
GGCATCCGCG TCGTCAAGAT CAAGAAGAAG CCCAAGCCCC TCTTCAGTGG TCCACGCCAG
AAGATCACGC CCAAGCACAT CGCCGTGTTC AGCCGCCAGT TGGCGACCAT GCTGTCGGCC
GGGGTTCCCC TGGTCCAGGC ATTCGACATC GTGGGCCGCG GCCATGACAA TCCGGCCATG
CAGGATCTGC TGATGAGCAT CAAGGCCGAC GTGGAAGCCG GCACGACCCT GGCGGACGCC
CTGTCGAAGC ATCCGGTCCA TTTCGACGAG CTTTTCTGTA ATCTGGTCCG GGCCGGCGAA
CAGGCCGGCG TGCTGGAAAC CTTGTTGCAC AAGGTGGCGG ACTACAAGGA AAAAACCGAG
TCCCTCAAGG GCAAGATCAA GAAGGCTTTG GCTTATCCGA TCGCCGTCGT CGTGGTTGCG
GTGATCGTGA CGTCGATCTT GCTGATTTTC GTGGTGCCGA CCTTCGAGGA TCTGTTCAAG
AGCTTCGGCG CCGATCTGCC GGCCTTCACC CAGATGGTGA TCAACCTTTC GCGTTGGCTG
CGGGACTGGT GGTACGTGGT GTTCGGCTCG CTAGGCGTAG CCGCCGCGGC GTTCGTGAAG
GCCCGGCAGC GCTCGCCGGC GTTCAATCAT CTGCTGGACC GGCTGGCCTT GGGGCTGCCG
GTCGTCGGCG CCATCCTGCG CAAGGCCGCC GTCGCGCGCT TCGCCCGGAC CTTGTCCACC
ATGTCCGCGG CCGGCGTGCC CCTGGTCGAG GCGTTGCAAT CGGTGGCGGG GGCGACCGGA
AACATCATCT ACGGTGAAGC GGTCATGCGT ATGCGCGAAG ACGTATCCAC CGGCCAGCAG
CTCCAGATGT CGATGCGCCA GGCCAACCTG TTCCCCAACA TGGTGATGCA GATGGTGGCG
ATTGGCGAGG AGTCGGGGGC GCTCGACAGC ATGCTGTCCA AGGTCGCCGA TTTCTACGAG
GAAGAAGTGG ACAATGCCGT GGATTCGTTG AGCAGCCTGC TCGAACCTTT GATCATGGTG
GTTCTGGGCG TGTTGATCGG GGGGCTCGTG ATCGCCATGT ATCTGCCGAT TTTCAAACTG
GGTTCCGTCG TCTGA
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| Protein sequence | MANQETALFV WEGLDRNGSR TRGEISSRSE ITARTELRRQ GIRVVKIKKK PKPLFSGPRQ
KITPKHIAVF SRQLATMLSA GVPLVQAFDI VGRGHDNPAM QDLLMSIKAD VEAGTTLADA
LSKHPVHFDE LFCNLVRAGE QAGVLETLLH KVADYKEKTE SLKGKIKKAL AYPIAVVVVA
VIVTSILLIF VVPTFEDLFK SFGADLPAFT QMVINLSRWL RDWWYVVFGS LGVAAAAFVK
ARQRSPAFNH LLDRLALGLP VVGAILRKAA VARFARTLST MSAAGVPLVE ALQSVAGATG
NIIYGEAVMR MREDVSTGQQ LQMSMRQANL FPNMVMQMVA IGEESGALDS MLSKVADFYE
EEVDNAVDSL SSLLEPLIMV VLGVLIGGLV IAMYLPIFKL GSVV
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