| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2076 |
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| Symbol | vacJ |
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| ID | 3104586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2235746 |
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| End bp | 2236600 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637171230 |
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| Product | vacJ lipoprotein |
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| Protein accession | YP_114506 |
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| Protein GI | 53803895 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACT CTCGAATCAT AGGCGGCCGG CTGGCGCTGG TCCTCATCGT CGCAGCAGGG
GCGGCCGGCT GTGCCTCGGA CAAGGTCAAA CAGGAGGGGC CCGAGGCGGG CGCCCCCCGG
ACGCATGTCG ATTCGCGCGA CCCTTGGGAG GAGTGGAACC GCGGTGTTCA GTCCTTTAAC
GATGGACTCG ACGACTATTT CATGAAGCCC GTGGCCAAGG GCTATCAATG GGCCACTCCC
AAGTTCGTCG ACAAGGGGGT CACGAATTTC TTCAGCAACG TCGACGACGT CTCGGTGATC
GCGAACGATC TGCTGCAGTT CAAATTGTTG CAGACGGGGC AGGACCTGGG GCGCTTCCTC
GTCAACTCGA CGATCGGCAT GGCGGGATTC ATCGACGTGG CCGATAAGCT CGATCTGCCC
AAACACTACG AGGATTTCGA CCAGACTTTG GCGACCTGGG GGGTGCCATC CGGTCCCTAT
CTCGTGCTGC CCGTCATCGG GCCGGGCTCG CCGCGCGGCG TGGTCGGGTT TGCCGGCGAC
ACCGCGGCCA ATCCCATCAA CTACATCACT CCCGCGAGCA TTCCCTGGGG CGCCGGAGCC
GGGCGGTTCG TGGACGTCCG GGCCGACATG CTGAGCGCGA CCAAGATCGC CGACGAGGCG
TCGGTGGACC GTTACGAGTT CATCCGCAAT GCCTATTTCC AGCAGCGGAA CTATCTCATT
CACGATGGCA ATCCTCCACT GGGGGAGGAT TTTGGCGGGG GCGAGGGCGT GGAAATGGAG
TTCGAGCTGC AGGGCATCGA AGACCGCGCC AACGAAGCCA TCGAGAAGGA AAAGGCAAAA
CCGGTATCGC CCTGA
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| Protein sequence | MENSRIIGGR LALVLIVAAG AAGCASDKVK QEGPEAGAPR THVDSRDPWE EWNRGVQSFN
DGLDDYFMKP VAKGYQWATP KFVDKGVTNF FSNVDDVSVI ANDLLQFKLL QTGQDLGRFL
VNSTIGMAGF IDVADKLDLP KHYEDFDQTL ATWGVPSGPY LVLPVIGPGS PRGVVGFAGD
TAANPINYIT PASIPWGAGA GRFVDVRADM LSATKIADEA SVDRYEFIRN AYFQQRNYLI
HDGNPPLGED FGGGEGVEME FELQGIEDRA NEAIEKEKAK PVSP
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