| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2040 |
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| Symbol | gltD |
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| ID | 3104458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 2191170 |
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| End bp | 2192609 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637171195 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_114472 |
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| Protein GI | 53803649 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.401643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAC CCACCGGTTT CATGGAAATC GCGCGGCAGG ATCGGCGTTA TACCCTGGTC
GCCGACCGGA TTCAGCACTA CCGCGAATTC GTCGTGCCGC TGAGCGACGA GGAAGTCAGC
CGTCAGGGCG CGCGTTGTAT GGACTGCGGC ATCCCCTATT GCCACCAGGG CTGCCCGATC
AACAACATCA TTCCCGATTG GAACGACCTG GTATACCAGG GTGACTGGGA GGAAGCCCTC
GAGGTACTGC ACAGCACCAA CAATTTCCCG GAGTTCACTG GTCGCATCTG CCCGGCTCCC
TGCGAAGCGG CTTGCACGTT GAACCTCAAT GACGAACCGG TCACCATCAA GACCATCGAA
TGCGCCATTG CGGACAAGGC CTGGGAAGAG AATCGGATCC GGCCGCAGAT TCCCAGCAGG
CGCACGGACA AGCGGGTCGC GGTGGTAGGC TCCGGGCCGG CCGGTCTCGC CTGCGCCCAG
CAACTGGCAC GCGCAGGTCA CGGCGTGGTG GTCTATGAAA AGGCCGACCG CATCGGCGGC
CTGCTGCGCT ACGGCATTCC CGACTTCAAG ATGGAAAAGC ATCTCATCGA CCGCCGCATC
GCCCAGATGC AGGCGGAAGG CGTGATCTTC CGTCCCAACA GCCATATCGG CGCCAACATT
CCGCTGAGCC GGCTGATGGC CGAATTCGAC GCCATCGTGC TGGCGGGTGG CTCGGAAAAA
CCACGCGACC TTCCCGTTCC CGGACGCGAA TTGGCCGGCA TCCATTTCGC GATGGAGTTC
CTCAAGCAGC AGAACCGGCG TGTCGCCGGT GATACGATAG ACGAAGCAGA AGGCATTCTG
GCGACCGACA AACACGTCAT CGTCATCGGC GGCGGCGATA CCGGTTCCGA CTGCATTGGC
ACCTCGGTGC GCCAGGGAGC CGCCTCGGTG GTGCAGTTGG AAATCCTGCC CCAACCGCCG
GCCAAGGAAG ACAAGAGTCT CACCTGGCCG AACTGGCCGA ACCGGCTGCG CACTTCTTCC
TCCCAGGAGG AGGGCTGTGA ACGGCATTGG AGCATCGCAA CCAAGCGTTT CAGCGGTGAA
AACGGCAAGG TGACCGCGAT CCATTGCATC AAGGTCAACT GGAAACAGGA AGGCGGGCGC
TGGGTCATGG AGGAAATTCC CGGCACCGAG TTCACACTCC AGGCCGACCT GGTTCTACTC
GCCATGGGCT TCGTCCATCC GGTACAGGAG GGACTGCTGC AGGAAACCGG CGTCCGGCTG
GACGAACGCG GCAATGTCCA GGCGGATACT CGAAACTATC GGACTTCGGT GGACAAGATC
TTCGCGGCCG GCGACATGAG GCGAGGACAG TCGCTGGTGG TCTGGGCCAT ACGCGAGGGA
CGCCAGGCAG CCCGCGCGGT GGACGAGTTC CTCATGGGCC GATCCGACTT GCCGCGGTAA
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| Protein sequence | MGKPTGFMEI ARQDRRYTLV ADRIQHYREF VVPLSDEEVS RQGARCMDCG IPYCHQGCPI
NNIIPDWNDL VYQGDWEEAL EVLHSTNNFP EFTGRICPAP CEAACTLNLN DEPVTIKTIE
CAIADKAWEE NRIRPQIPSR RTDKRVAVVG SGPAGLACAQ QLARAGHGVV VYEKADRIGG
LLRYGIPDFK MEKHLIDRRI AQMQAEGVIF RPNSHIGANI PLSRLMAEFD AIVLAGGSEK
PRDLPVPGRE LAGIHFAMEF LKQQNRRVAG DTIDEAEGIL ATDKHVIVIG GGDTGSDCIG
TSVRQGAASV VQLEILPQPP AKEDKSLTWP NWPNRLRTSS SQEEGCERHW SIATKRFSGE
NGKVTAIHCI KVNWKQEGGR WVMEEIPGTE FTLQADLVLL AMGFVHPVQE GLLQETGVRL
DERGNVQADT RNYRTSVDKI FAAGDMRRGQ SLVVWAIREG RQAARAVDEF LMGRSDLPR
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