Gene MCA1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1996 
Symboltmk 
ID3104386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand- 
Start bp2145583 
End bp2146209 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID637171151 
Productthymidylate kinase 
Protein accessionYP_114428 
Protein GI53803739 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGG GCAAATTCAT CACGCTGGAG GGAGGCGAAG GCGTCGGCAA GAGCACCAAC 
GTCGATTTCG TCGTGAGCCG GCTGCGCGCC CGAGGCCTGA AGGTCGTCGC GACCCGGGAG 
CCGGGCGGTA CCGCTTTCGG GGAAGCGGTA CGGGAAATTT TCCTGCGTCA GGACACGGTG 
CGGCCGGAAG CCGAATTGCT GTTGTTGTTC GCGGCCCGCG TGCACCATCT TCGGGAAGTG 
ATCGAGCCGG CTTTGCGGCG CGGTGACTGG GTGGTCTGTG ACCGTTTCAC CGACGCCAGC 
TATGCCTATC AGGGCGCCGG GCGTGGTATC GCCCCTGGCG TCATCGATTT CCTGCGGGAC 
TGGATTCAGG CCGGGCTGAG GCCCGATCTG ACCCTCCTGC TGGATGCACC GGTGGACACC 
GGTTTGAAGC GGGCGCATCA ACGCAGCGGT CCGGATCGGT TGGAGAGAGA AGACAGCGCC 
TTTTTCGCCC GGGTGCGGGA AGGCTATCTG GCGCTGGCGC GGGCAGAGCC GGGCCGGATA 
CGGGTGATCG ATGCCGACCG GCCTCTGGCC CTGGTGCAGA CGGCCATCGC CACCCAAGTG 
GATTCCCTGT TGGCCGGTCA TGTCTGA
 
Protein sequence
MTPGKFITLE GGEGVGKSTN VDFVVSRLRA RGLKVVATRE PGGTAFGEAV REIFLRQDTV 
RPEAELLLLF AARVHHLREV IEPALRRGDW VVCDRFTDAS YAYQGAGRGI APGVIDFLRD 
WIQAGLRPDL TLLLDAPVDT GLKRAHQRSG PDRLEREDSA FFARVREGYL ALARAEPGRI 
RVIDADRPLA LVQTAIATQV DSLLAGHV