| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1983 |
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| Symbol | hfq |
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| ID | 3102156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2135172 |
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| End bp | 2135420 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637171138 |
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| Product | hfq protein |
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| Protein accession | YP_114415 |
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| Protein GI | 53803766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.562833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAAGG GCCAAAATCT GCAAGATCCA TTCCTGAATA CACTCCGGAA AGAGCATGTT
CCGGTTTCGA TCTATCTGGT CAACGGAATC AAGCTGCAAG GAAAGGTGGA TTCGTTCGAC
CAGTATGTAA TCATGCTGAA GAACACCGTC AGCCAGATGG TATACAAACA TGCGATTTCG
ACCATCGTGC CCGGCCGCCC GGTGCGCGTC CCACATGCGG GTGAAAGTGG TGACGAGGAG
GCCGAATGA
|
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| Protein sequence | MSKGQNLQDP FLNTLRKEHV PVSIYLVNGI KLQGKVDSFD QYVIMLKNTV SQMVYKHAIS
TIVPGRPVRV PHAGESGDEE AE
|
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