| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1900 |
|---|
| Symbol | |
|---|
| ID | 3103584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2046713 |
|---|
| End bp | 2047657 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637171057 |
|---|
| Product | cation efflux family protein |
|---|
| Protein accession | YP_114335 |
|---|
| Protein GI | 53803773 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.137192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCACG ACGACCACGA ACACCATCAT GCGGCTGATT CCGCCGGAGC GCAAGGGCGA
TTGGTCTGGG CGTTGATCCT CACTGGCGGC TTCGTCGTGT TCGAAGCGCT GGCGGGCTGG
AAGGCGAACA GCCTCGCGCT GCTGACCGAC GCCGTGCACA ACCTGAGCGA CGTGTTGGCG
CTGGGCCTGA GCTGGTACGC CATGCGGCTG ACTGCCCAGC CGGCGCACGC GGCCAAGACT
TTCGGCTACC ACCGAGCCGG CATCCTTGCC GCCCTCGCCA ATTCGGCCGG GCTGGTGGGC
GTTGCCTTGT ACATTCTCTA CGACGCCTAC GTCCGCCTCC TCAGTCCCGC TCCGGTTCAG
GCCGACATCC TGATCGGGGT GGGCGGGGCG GCGCTGCTGG TCAATGCCTT CACCGCCTGG
CTCGTCCATC ACGGCAGCCA CGACGACCTG AACATGCGCA GCGCCTTCCT GCATCTGTTG
GGCGATGTGG TGTCAACCCT CGGTGCCATC GCCGCGGGTG TGGCGATCCG CTACACCGGT
CTGTACTGGC TCGATCCGGC GGTCAGCGTC CTGATAGCGC TGCTCATCCT CTGGAACGCC
AAGGGGCTGA TGGCCGAAGT CATGGACATC CTGCTGGAAA GCACGCCGCG GGATGTGGAC
ATGGGTTCGA TGGTGCGGGA CATGATGCAG GTGGAAGGTG TGCATGGGGT GCACCATCTC
CATGTGTGGA GCATTTCGCG GCAGTTGCGC ATGCTGTCCG CTCATATCGT GACGGACGAC
ATCCGCCTCA GTGAAGGCGA GGGGCTGCAG AAGCGGGTCA CGCGTCTGCT CGCTCAACGT
TATGGTATTG CGCATACGAC GCTGCAACTG GAGTCCGAGA GCTGCCAGCC GGATTCGCTG
TATTGCGACA TCTCCAGGCC GAATCACCGC TATCATGGTG AATGA
|
|---|
| Protein sequence | MPHDDHEHHH AADSAGAQGR LVWALILTGG FVVFEALAGW KANSLALLTD AVHNLSDVLA
LGLSWYAMRL TAQPAHAAKT FGYHRAGILA ALANSAGLVG VALYILYDAY VRLLSPAPVQ
ADILIGVGGA ALLVNAFTAW LVHHGSHDDL NMRSAFLHLL GDVVSTLGAI AAGVAIRYTG
LYWLDPAVSV LIALLILWNA KGLMAEVMDI LLESTPRDVD MGSMVRDMMQ VEGVHGVHHL
HVWSISRQLR MLSAHIVTDD IRLSEGEGLQ KRVTRLLAQR YGIAHTTLQL ESESCQPDSL
YCDISRPNHR YHGE
|
|---|
| |