Gene MCA1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1815 
SymbolispH 
ID3104077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1947649 
End bp1948590 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID637170975 
Producthydroxymethylbutenyl pyrophosphate reductase 
Protein accessionYP_114253 
Protein GI53804096 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA TCCTCGCCAA TCCCCGCGGA TTCTGCGCCG GCGTCGACCG CGCCATCGAG 
ATCGTCGACC GCGCCATCGA GGTGTTCGGC GCGCCGATCT ATGTACGCCA TGAAGTCGTC
CACAACCGCT ACGTGGTCGA TGGGCTCCGG GAGCGTGGCG CGGTATTCGT CGAGGAGCTG
TCGGAAGTGC CCGAGAATTC GACGGTGATC TTCAGCGCCC ACGGGGTCTC CAAGCAGATC
CAGGAAGAAG CCAGAGAGCG CGGCCTGCAG GTCTTCGACG CCACCTGCCC GCTGGTCACC
AAGGTTCACA TCGAAGTGCA CCAACATGCC AGCGAAGGCC GCGAAATCGT CTTCATCGGC
CACGCCGGAC ACCCGGAAGT GGAAGGCACG ATGGGGCAGT ACGACAACCC GGCCGGGGGT
ATCTATCTGG TGGAATCGCC GGAAGACGTC GAAATGCTTC AGGTAAAGAA TCCGGACAAC
CTCGCCTACG TCACTCAGAC CACGCTTTCC ATCGACGACA CCGGTGCCGT GGTGGAAGCG
CTGAAAATGC GTTTCCCGAA GATACTGGGC CCGCGCAAGG ACGACATCTG CTATGCGACT
CAGAACCGCC AGGATGCCGT CAAGAAACTG GCGGCCCAGT GCGACACCAT CCTGGTGGTC
GGATCGCCCA ACAGCTCCAA CTCCAACCGC CTGCGCGAAA TCGCCGACAA GCTCGGCCGT
AAAGCCTTTC TGATCGACAA CGCCGCCCAG TTGACCCGCG ACATGGTGGC GGGTGCCCAG
CGCATCGGCG TCACCGCCGG CGCTTCGGCC CCCGAGATCC TGGTGCAGCA GGTCATCGCC
CAGCTCAAGG AATGGGGCGG TCGCACCGCC ACGGAAACCC AGGGCATCGA GGAAAAAGTG
GTGTTTTCCC TGCCCAAGGA ACTGCGCCGG CTCAACGCCT GA
 
Protein sequence
MEIILANPRG FCAGVDRAIE IVDRAIEVFG APIYVRHEVV HNRYVVDGLR ERGAVFVEEL 
SEVPENSTVI FSAHGVSKQI QEEARERGLQ VFDATCPLVT KVHIEVHQHA SEGREIVFIG
HAGHPEVEGT MGQYDNPAGG IYLVESPEDV EMLQVKNPDN LAYVTQTTLS IDDTGAVVEA
LKMRFPKILG PRKDDICYAT QNRQDAVKKL AAQCDTILVV GSPNSSNSNR LREIADKLGR
KAFLIDNAAQ LTRDMVAGAQ RIGVTAGASA PEILVQQVIA QLKEWGGRTA TETQGIEEKV
VFSLPKELRR LNA