Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1815 |
Symbol | ispH |
ID | 3104077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1947649 |
End bp | 1948590 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170975 |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_114253 |
Protein GI | 53804096 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCA TCCTCGCCAA TCCCCGCGGA TTCTGCGCCG GCGTCGACCG CGCCATCGAG ATCGTCGACC GCGCCATCGA GGTGTTCGGC GCGCCGATCT ATGTACGCCA TGAAGTCGTC CACAACCGCT ACGTGGTCGA TGGGCTCCGG GAGCGTGGCG CGGTATTCGT CGAGGAGCTG TCGGAAGTGC CCGAGAATTC GACGGTGATC TTCAGCGCCC ACGGGGTCTC CAAGCAGATC CAGGAAGAAG CCAGAGAGCG CGGCCTGCAG GTCTTCGACG CCACCTGCCC GCTGGTCACC AAGGTTCACA TCGAAGTGCA CCAACATGCC AGCGAAGGCC GCGAAATCGT CTTCATCGGC CACGCCGGAC ACCCGGAAGT GGAAGGCACG ATGGGGCAGT ACGACAACCC GGCCGGGGGT ATCTATCTGG TGGAATCGCC GGAAGACGTC GAAATGCTTC AGGTAAAGAA TCCGGACAAC CTCGCCTACG TCACTCAGAC CACGCTTTCC ATCGACGACA CCGGTGCCGT GGTGGAAGCG CTGAAAATGC GTTTCCCGAA GATACTGGGC CCGCGCAAGG ACGACATCTG CTATGCGACT CAGAACCGCC AGGATGCCGT CAAGAAACTG GCGGCCCAGT GCGACACCAT CCTGGTGGTC GGATCGCCCA ACAGCTCCAA CTCCAACCGC CTGCGCGAAA TCGCCGACAA GCTCGGCCGT AAAGCCTTTC TGATCGACAA CGCCGCCCAG TTGACCCGCG ACATGGTGGC GGGTGCCCAG CGCATCGGCG TCACCGCCGG CGCTTCGGCC CCCGAGATCC TGGTGCAGCA GGTCATCGCC CAGCTCAAGG AATGGGGCGG TCGCACCGCC ACGGAAACCC AGGGCATCGA GGAAAAAGTG GTGTTTTCCC TGCCCAAGGA ACTGCGCCGG CTCAACGCCT GA
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Protein sequence | MEIILANPRG FCAGVDRAIE IVDRAIEVFG APIYVRHEVV HNRYVVDGLR ERGAVFVEEL SEVPENSTVI FSAHGVSKQI QEEARERGLQ VFDATCPLVT KVHIEVHQHA SEGREIVFIG HAGHPEVEGT MGQYDNPAGG IYLVESPEDV EMLQVKNPDN LAYVTQTTLS IDDTGAVVEA LKMRFPKILG PRKDDICYAT QNRQDAVKKL AAQCDTILVV GSPNSSNSNR LREIADKLGR KAFLIDNAAQ LTRDMVAGAQ RIGVTAGASA PEILVQQVIA QLKEWGGRTA TETQGIEEKV VFSLPKELRR LNA
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