Gene MCA1809 details

Gene Information

• Locus tag: MCA1809
• ID: 3104327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1941163
• End bp: 1941870
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637170969
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_114247
• Protein GI: 53804110
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.596439
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAACAG CGACTGTGGC GGTAGAATGC CGGGGAGTCC GGAAAACTTA CGACGGCAGC 
GGGCAGCAGG TCGTCGCGCT GCGGGGCATC GATCTCGACA TCCATGCCGG CGAGCTGATG 
ATGCTGGTCG GCCCGTCCGG CTGCGGCAAG ACCACCTTGA TATCGGTGAT CGCCGGCATC 
CTCGACCAGG ACGAAGGGCT TTGCAGGGTA TTCGGCCACG ACCTGTTGCA CATGAAGGAC 
AAGGACAAGC TCAGGTTCCG TGCCGCCAAC ATCGGCTTCG TGTTCCAGAC CTACAACCTC 
CTGCCCAGCC TGACGGCGGC GGAAAACGTG TCGATCCCGA TGATCCTCAA CGGCATCAGC 
CGTCAAAAGG CGCAGCGCCG GGCCGTGGAG GTGCTGGAGC GGGTTGGGCT GGCCGAGCGC 
ACCGGATCTC TGCCCTCAGA GCTCTCCGGC GGCCAGCAGC AGCGCGTGGC GATCGCCCGG 
GCCCTGGTCC ACGGGCCGAA GCTGATCGTC TGCGACGAGC CTACGAGCGC GCTGGACCAT 
GAAACCGGAC ACCGGGTCAT GGATTTGCTG AAGCAGGTGG CACTGGACGA GGACCGGGCG 
CTGGTGATCG TCACCCACGA CGCCCGGATC TTCGAGTTTG CCGACTGCAT CGCGCAGATG 
GACGACGGGC AGGTGGTGAA AGTCGTCCGG TCGTCCGGCC CGTCGTGA 

 

Protein sequence

MGTATVAVEC RGVRKTYDGS GQQVVALRGI DLDIHAGELM MLVGPSGCGK TTLISVIAGI 
LDQDEGLCRV FGHDLLHMKD KDKLRFRAAN IGFVFQTYNL LPSLTAAENV SIPMILNGIS 
RQKAQRRAVE VLERVGLAER TGSLPSELSG GQQQRVAIAR ALVHGPKLIV CDEPTSALDH 
ETGHRVMDLL KQVALDEDRA LVIVTHDARI FEFADCIAQM DDGQVVKVVR SSGPS