Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1789 |
Symbol | clpA |
ID | 3103829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1918320 |
End bp | 1920590 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637170949 |
Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
Protein accession | YP_114227 |
Protein GI | 53804153 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGTA AAGAACTCGA ACAATCATTG AATGCGGCCT TCCGTACCGC CTACGAGAAA CGCCATGAGT TCATCACCGT GGAGCACCTG CTGCTGGCCA TGCTCGACAA CGGCGCCGCC ATCGAAGTCC TGCGTGCCTG CGGTGGCAAT CTCGACCTGC TCCGCAACGA ACTGAACGAA TTCCTGGATG AAACCACGCC GCTGATCCCT GCCGGCGTCA AGCGTGATAC CCAGCCGACG CTGGGTTTCC AGCGGGTGCT CCAGCGCGCG GCCTTTCACG TGCAGTCGTC GGGGAAAAAA GAGGTTACCG GAGCGAACGT CCTGGTCGCC ATCTTCAGCG AGCAGGACTC GCATGCGGTC TATCTGTTGC ACAAGCAGGA CATCACCCGC CTCGACGTGG TGAACTTCAT TTCCCACGGC ATCTCCAAAG TGCGGGACGA GGCTGATGGC ACTGCCAGGG GCTCGGCTCC CGAATCCGAC GACGCCGAAA GCGGGAGCAG CGCCAACCCG CTCGAAAAGT TCGCCACCAA TCTCAACGAA TCCGCCCGGC GCGGAAAAAT CGACCCGCTG ATCGGCCGCA AGGACGAACT GGAGCGCACG GTCCAGGTGC TGTGTCGCCG AAGGAAGAAT AATCCGTTGT TCGTCGGCGA AGCCGGGGTG GGTAAAACTG CCATCGCCGA AGGTCTGGCG AAGAAAATCG TTGAAAACGA CGTACCGGAA GTGCTCAAGG ACAGCACGAT CTATTCGCTG GATCTCGGCA GTCTGGTGGC GGGAACCAAG TACCGCGGTG ATTTCGAGAA GCGTCTGAAG TCGCTCCTGG CGCAGCTCAA GAAGGAGCCG AATGCCATCC TCTTCATCGA CGAGATTCAC ACCATCATCG GCGCTGGCTC CGCCTCGGGC GGGGTGATGG ATGCATCCAA TCTGATCAAA CCGGTCCTGG CCTCAGGCGA GTTGCGCTGC ATCGGTTCGA CGACCTACCA GGAATACCGC GGCATCTTCG AAAAGGACCG CGCGCTGGCC CGCCGCTTCC AGAAAATCGA TATTCCCGAA CCCTCGGTCG AAGAAACCTA CCAGATTCTC AAAGGACTGA AGACCCGTTT CGAACAGCAC CATGACGTCA AATATTCCCT CGCTGCGCTG CGCACTGCGG TGGAGCTGTC GGACCGGTAC ATCAACGACC GTCATCTCCC CGACAAAGCC ATCGACGTCA TCGACGAGGC GGGAGCGAAT CAGCGCCTGC TGCCGCCGTC GCGCCGCAAG AAGACCATCG GCACCGTGGA CATCGAGGAC ATCGTTTCGA AGATCGCGCG GATTCCCGCC AAAACCGTTT CCGCCAACGA CAAGGAGAAA TTGCGCGACC TGGAATCCAA TCTGAAGATG CTGGTCTTCG GTCAGGATGA AGCCATAGCC GCACTGTCGT CGGCGATCAA ATTGTCCCGC GCAGGTCTGC GCGACGGTCA GAAACCCATA GGCTCATTTC TTTTTGCCGG CCCCACTGGC GTAGGCAAAA CGGAAGTGAC ACGCCAGCTC GCCCGCATGC TCGGTGTCGA GCTGATCCGT TTCGACATGT CCGAATACAT GGAGCGGCAC ACGGTGTCCC GGCTTATCGG AGCGCCGCCG GGCTATGTCG GATTCGACCA GGGAGGTCTT CTGACCGAAG CCATCAACAA ACATCCGCAT GCCGTGCTGC TGCTCGACGA AATCGAAAAA GCGCACCCGG ACGTCTTCAA TCTGCTGTTA CAAGTGATGG ATCACGGCAC TCTGACGGAC AACAACGGGC GCAAGGCCGA CTTCCGTAAC ATCATCCTGG TCATGACCAC CAATGCCGGG GCTTTCGAGG GTGCCCGCCC GTCGATAGGT TTCACTCCGC AAGACCACTC CACCGATAGC TTGAAAGCGA TCGAACGCAC CTTCTCGCCC GAGTTCCGGA ACCGCCTCGA CGCGATCATC CAGTTCAACC CGCTCAGCCC GGAAACGATC GGGCATGTGG TGGACAAATT CATCTTCGAA CTCGAGGCGC AGTTGGCCGA GAAGCAGGTA TCCCTGGTCA TCGAGCCGGA CGCACGTGCA TGGCTGGCCG AGCACGGTTT CGACTCGAAG ATGGGAGCGC GTCCGATGGC GCGCGTGATT CAGGAAAACA TCAAGAAGCC GCTGGCCGAG GAAATCTTGT TCGGCCGCCT CGCGCATGGT GGCACGGTGC GTGTCGGCGC TTCCTCCGGC GGACTGACAT TTACCTACGA AACCCGCCAA AAAGCCGCCG AGCCCGTATG A
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Protein sequence | MLSKELEQSL NAAFRTAYEK RHEFITVEHL LLAMLDNGAA IEVLRACGGN LDLLRNELNE FLDETTPLIP AGVKRDTQPT LGFQRVLQRA AFHVQSSGKK EVTGANVLVA IFSEQDSHAV YLLHKQDITR LDVVNFISHG ISKVRDEADG TARGSAPESD DAESGSSANP LEKFATNLNE SARRGKIDPL IGRKDELERT VQVLCRRRKN NPLFVGEAGV GKTAIAEGLA KKIVENDVPE VLKDSTIYSL DLGSLVAGTK YRGDFEKRLK SLLAQLKKEP NAILFIDEIH TIIGAGSASG GVMDASNLIK PVLASGELRC IGSTTYQEYR GIFEKDRALA RRFQKIDIPE PSVEETYQIL KGLKTRFEQH HDVKYSLAAL RTAVELSDRY INDRHLPDKA IDVIDEAGAN QRLLPPSRRK KTIGTVDIED IVSKIARIPA KTVSANDKEK LRDLESNLKM LVFGQDEAIA ALSSAIKLSR AGLRDGQKPI GSFLFAGPTG VGKTEVTRQL ARMLGVELIR FDMSEYMERH TVSRLIGAPP GYVGFDQGGL LTEAINKHPH AVLLLDEIEK AHPDVFNLLL QVMDHGTLTD NNGRKADFRN IILVMTTNAG AFEGARPSIG FTPQDHSTDS LKAIERTFSP EFRNRLDAII QFNPLSPETI GHVVDKFIFE LEAQLAEKQV SLVIEPDARA WLAEHGFDSK MGARPMARVI QENIKKPLAE EILFGRLAHG GTVRVGASSG GLTFTYETRQ KAAEPV
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