Gene MCA1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1785 
SymboltrmU 
ID3102875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1915436 
End bp1916551 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID637170945 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_114223 
Protein GI53804157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGC ATGTGGTTGT CGGGATGTCG GGAGGGGTGG ATTCGTCGGT CACCGCCTTG 
CTGCTGCTCC GCCAGGGTTA CCGGGTCAGC GGACTGTTCA TGAAGAACTG GGAGGAGGAC
GATGGCACCG AGTACTGTAC CGCGGCGCAG GATTTCGCCG ATGCCAAGCA GGTGTGCGAG
CGTCTAGGAG TCGAACTGCA CACGGTAAAC TTTGCGGCGG AATACTGGGA TGAGGTGTTC
GAGGTGTTCC TGAGCGAGTA CCGGGCCGGG CGGACGCCGA ATCCCGACAT CCTCTGCAAC
AAGCAGATCA AGTTCAGAGC CTTCCTCGAC TACGCAGAAG ACCTGGGCGC CGACCTCATC
GCCATGGGGC ATTATGCCCG GGTGGCGGAG GAAGAGGGTC GGTTGCAGCT CCTCAAGGGA
TGTGATCCCG GTAAGGATCA GAGCTATTTC CTTTATACCC TGCAGCAGGA GCAACTCGCC
CGCACTCTGT TTCCCCTGGG CGGGCTGCGC AAGACCGAGG TGCGCGCATT GGCCGCCGGC
GCCGGTTTTG CCAATGACGC CAAGAAGGAC AGCACCGGCA TCTGTTTCAT CGGCGAACGA
CGCTTCAAGG ACTTCCTCGC GCGTTATCTG CCGGCCCGGC CGGGGGACAT CCGCACGCCG
GAGGGCGTGC TCCTCGGCCG GCACGATGGC CTGATGTACT ACACGCTGGG CCAGCGTTCC
GGACTCGGCA TCGGCGGTAC GAGGGCAGGC GGCCAGGAGC CTTGGTATGT GTTGGACAAG
GATCTGGCCA GAAACGTGCT GGTGGTGGGC CAGGGCCACG ATCACCCCCT TCTCTACCGG
GACGGGCTGC TGGCCAGCCG GCTTCATTGG GTCGACGGCG CTGGTCCCGC GCCCGGGGAG
ATACTGCGCT GTGCGGCCAA GACCCGCTAC CGCCAGAGTG ACCAGGACTG CCGCATCCGT
CTGATCGGCG AAGACCGGTT GGAGGTCGTG TTCGCCCAGC CCCAGCGTGC CGTCACTCCC
GGCCAGTCGG TCGTGTTTTA CCAGGACGAT TGCTGCCTCG GCGGCGGTGT CATCGACTTA
ACCTTTAATG CGGACTCTCG GGCCGATGCC GCGTAA
 
Protein sequence
MKPHVVVGMS GGVDSSVTAL LLLRQGYRVS GLFMKNWEED DGTEYCTAAQ DFADAKQVCE 
RLGVELHTVN FAAEYWDEVF EVFLSEYRAG RTPNPDILCN KQIKFRAFLD YAEDLGADLI
AMGHYARVAE EEGRLQLLKG CDPGKDQSYF LYTLQQEQLA RTLFPLGGLR KTEVRALAAG
AGFANDAKKD STGICFIGER RFKDFLARYL PARPGDIRTP EGVLLGRHDG LMYYTLGQRS
GLGIGGTRAG GQEPWYVLDK DLARNVLVVG QGHDHPLLYR DGLLASRLHW VDGAGPAPGE
ILRCAAKTRY RQSDQDCRIR LIGEDRLEVV FAQPQRAVTP GQSVVFYQDD CCLGGGVIDL
TFNADSRADA A