Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1785 |
Symbol | trmU |
ID | 3102875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1915436 |
End bp | 1916551 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170945 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_114223 |
Protein GI | 53804157 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGC ATGTGGTTGT CGGGATGTCG GGAGGGGTGG ATTCGTCGGT CACCGCCTTG CTGCTGCTCC GCCAGGGTTA CCGGGTCAGC GGACTGTTCA TGAAGAACTG GGAGGAGGAC GATGGCACCG AGTACTGTAC CGCGGCGCAG GATTTCGCCG ATGCCAAGCA GGTGTGCGAG CGTCTAGGAG TCGAACTGCA CACGGTAAAC TTTGCGGCGG AATACTGGGA TGAGGTGTTC GAGGTGTTCC TGAGCGAGTA CCGGGCCGGG CGGACGCCGA ATCCCGACAT CCTCTGCAAC AAGCAGATCA AGTTCAGAGC CTTCCTCGAC TACGCAGAAG ACCTGGGCGC CGACCTCATC GCCATGGGGC ATTATGCCCG GGTGGCGGAG GAAGAGGGTC GGTTGCAGCT CCTCAAGGGA TGTGATCCCG GTAAGGATCA GAGCTATTTC CTTTATACCC TGCAGCAGGA GCAACTCGCC CGCACTCTGT TTCCCCTGGG CGGGCTGCGC AAGACCGAGG TGCGCGCATT GGCCGCCGGC GCCGGTTTTG CCAATGACGC CAAGAAGGAC AGCACCGGCA TCTGTTTCAT CGGCGAACGA CGCTTCAAGG ACTTCCTCGC GCGTTATCTG CCGGCCCGGC CGGGGGACAT CCGCACGCCG GAGGGCGTGC TCCTCGGCCG GCACGATGGC CTGATGTACT ACACGCTGGG CCAGCGTTCC GGACTCGGCA TCGGCGGTAC GAGGGCAGGC GGCCAGGAGC CTTGGTATGT GTTGGACAAG GATCTGGCCA GAAACGTGCT GGTGGTGGGC CAGGGCCACG ATCACCCCCT TCTCTACCGG GACGGGCTGC TGGCCAGCCG GCTTCATTGG GTCGACGGCG CTGGTCCCGC GCCCGGGGAG ATACTGCGCT GTGCGGCCAA GACCCGCTAC CGCCAGAGTG ACCAGGACTG CCGCATCCGT CTGATCGGCG AAGACCGGTT GGAGGTCGTG TTCGCCCAGC CCCAGCGTGC CGTCACTCCC GGCCAGTCGG TCGTGTTTTA CCAGGACGAT TGCTGCCTCG GCGGCGGTGT CATCGACTTA ACCTTTAATG CGGACTCTCG GGCCGATGCC GCGTAA
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Protein sequence | MKPHVVVGMS GGVDSSVTAL LLLRQGYRVS GLFMKNWEED DGTEYCTAAQ DFADAKQVCE RLGVELHTVN FAAEYWDEVF EVFLSEYRAG RTPNPDILCN KQIKFRAFLD YAEDLGADLI AMGHYARVAE EEGRLQLLKG CDPGKDQSYF LYTLQQEQLA RTLFPLGGLR KTEVRALAAG AGFANDAKKD STGICFIGER RFKDFLARYL PARPGDIRTP EGVLLGRHDG LMYYTLGQRS GLGIGGTRAG GQEPWYVLDK DLARNVLVVG QGHDHPLLYR DGLLASRLHW VDGAGPAPGE ILRCAAKTRY RQSDQDCRIR LIGEDRLEVV FAQPQRAVTP GQSVVFYQDD CCLGGGVIDL TFNADSRADA A
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