Gene MCA1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1782 
Symbol 
ID3102211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1912107 
End bp1913414 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID637170942 
Productrecombination factor protein RarA 
Protein accessionYP_114220 
Protein GI53804168 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGCTG ACTTCTCCCA ACCGCTGGCC GACCGTCTGC GTCCCCGGAC GCTGGACGAA 
TACATCGGCC AGCTCCACCT CATCGAGCCG GGCCGGCCGC TGTACGAGTC GATCCGGCGC
GGCCGTCTCC ATTCGATGAT CTTCTGGGGC CCGCCCGGCA CAGGCAAGAC GACTCTGGCG
CGGCTGGTCG CCCGCCATGC CGATGCCGAG TTTCTGCCGG TTTCGGCCGT GTTGTCGGGG
GTGAAGGAAA TCCGCGAAGC CTTGGCTCGG GCTGTGCAAT TCAAGGCGGC CGGCCGCCGT
GCCATCCTGT TCGTCGACGA GGTGCATCGC TTCAACAAGT CGCAGCAGGA TGCATTCCTG
GCCCATGTCG AGGACGGCAC GGTCAGCTTC ATCGGCGCCA CCACCGAAAA TCCCTCGTTC
GAGGTCAACA GCGCCTTGCT GTCGCGGGCC AGGGTCTATG TGCTGAAAGC CCTGACCGAG
GCCGACCTGT TGGGCGTCAT TGATCGCGCG CTGTCGGACG CTGAACGCGG CCTGGGCGGG
CGCGGCCTGA ACATGTCCGA CCCCGTGCGC ATGGCTTACG TCCGTGCCGC CGATGGCGAT
GCCCGGCGCT TGCTGAATCT CCTGGAAATC ACCGCGGATC TGCTGGACGC CGGCCAGACG
GTGGTGAGCG AGGAGGTCGC ACGGCAGGTC CTCGCGTCTG GAACCACACG CCGTTTCGAC
AAGCAGGGCG AGGAGTTCTA CAACCAGATT TCCGCCCTGC ACAAATCGGT GCGCGGCAGT
TCGCCCGACG CCGCACTGTA CTGGTTGTGC CGGATGCTGG ACGGGGGCTG CGATCCGCTT
TATCTAGCCC GGCGCCTGGT GCGGATCGCA TCCGAGGATA TCGGTAACGC CGACCCCAAG
GCGTTGGAGC TGTGTCTGAA TGCCTGGAAC GCCCAGGAAC GTCTGGGCAG CCCGGAGGGC
GAGCTGGCCC TGGCGCAGGC CGTCGTGTAT TTGGCCGTCG CTCCCAAGAG CAATGCGGTC
TACGAAGCCT ACAAGGCCGC CCGGGCGGAT GCCGCCCGAT CGGGCAGTCT GCCGGTGCCC
CTGCACCTGC GCAATGCCCC GACGGGCTTG ATGAAGGGCC TGGATTACGG CAAGGGATAC
CGCTATGCGC ACGACTATCC GGACGCGTAC GTTCCGGGCG AAAACTATTT CCCCGAGGGG
CTGGAGCGAC GGGAATACTA CCGCCCGGTC AACCGCGGCA TGGAGATCAA GATCGCCGAG
AAGCTGGAGC GTCTCAAGGC GCTGGATAAG GAGGCGGACG AGCGGTGA
 
Protein sequence
MSADFSQPLA DRLRPRTLDE YIGQLHLIEP GRPLYESIRR GRLHSMIFWG PPGTGKTTLA 
RLVARHADAE FLPVSAVLSG VKEIREALAR AVQFKAAGRR AILFVDEVHR FNKSQQDAFL
AHVEDGTVSF IGATTENPSF EVNSALLSRA RVYVLKALTE ADLLGVIDRA LSDAERGLGG
RGLNMSDPVR MAYVRAADGD ARRLLNLLEI TADLLDAGQT VVSEEVARQV LASGTTRRFD
KQGEEFYNQI SALHKSVRGS SPDAALYWLC RMLDGGCDPL YLARRLVRIA SEDIGNADPK
ALELCLNAWN AQERLGSPEG ELALAQAVVY LAVAPKSNAV YEAYKAARAD AARSGSLPVP
LHLRNAPTGL MKGLDYGKGY RYAHDYPDAY VPGENYFPEG LERREYYRPV NRGMEIKIAE
KLERLKALDK EADER