Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1756 |
Symbol | gabD |
ID | 3103308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1876907 |
End bp | 1878382 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637170917 |
Product | succinate-semialdehyde dehydrogenase (NADP+) |
Protein accession | YP_114195 |
Protein GI | 53804215 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCATG AACTCCGACT CGACCAGCCC GGCCTGCTGC GTACCCGGTG CCTGATCGAC GGCCAATGGG TCGACGCCGA CCACTCAAAG ACTTTTTCCG TGACCGATCC GGCCACCGGC CGGGCTCTGG CCGATGTCCC TGCCATGGGC GCCGCCGAGA CCATGCGGGC GATCGCCGCC GCGGAACACG CCTGGACCGG CTGGCGCGGC AAGACCGCCA AGGAGCGCGC CGCGGTCTTG CGCCGCTGGT ACGAGCTGAT CCTGAGCCAT ACCGAAGACC TCGCTCGCAT CCTCACCGCC GAGCAGGGCA AGCCACTGAC CGAGGCCCGC AACGAGATCG GCTACGCCGC CGGCTTCGTC GAATGGTTCG CGGAGGAGGC TGGACGCGCC TACGGCGAAA CCATCCCCTC CCCCGTCCCG GACAAGCGGC TGCTGGTCAT CCGCCAGCCC ATCGGTGTAT GCGCAGCCAT CACGCCCTGG AATTTCCCGG CGGCGATGAT CACCCGCAAG ATCGCGCCGG CCCTGGCCGC CGGTTGCACC GTAGTGGTGA AACCCGCCGA GCAGACGCCG CTGACCGCCC TCGCCCTGGC CGACCTAGCG GTGCAGGCGG GCTTTCCGCC CGGCGTGATC AACGTCGTGA CCGGCGATCC GGAAGCGATC GGCGGCGAAC TGACTTCCAA TCCCTTGATC CGCAAACTCT CCTTCACTGG CTCGACCGAG GTCGGACGCC TCTTGATGGC GCAATGCGCC GCGACGGTGA AGAAAATCTC GCTGGAGCTG GGCGGCAACG CGCCCTTCAT CGTGTTCGAG GACGCCGATC TGGATGCCGC GGTCGAGGGC GCCTTGCTGT CGAAGTACCG CAACACCGGC CAGACCTGCG TCTGCACCAA CCGCTTCCTG ATCCAGGATT CGATCTACGA CGCCTTCGCC GAACGCCTCG CGGCCAAGGT GCGCAGGCTC GAGGTCGGCA ACGGCCTGGA CGAGGGCGTC GTCCAAGGAC CGCTCATCGA CGAGCAGGCG CTGGCCAAGG TGGAGCGACA TATCGCCGAC GCCCTGGACA GAGGCGCCCG GGTGCTGGCG GGCGGCGGAC GGCACCCCCT GGGCGGACGG TTTTTCCAGC CCACGGTGCT CGTCGATGTC ACGCCAGAGA TGCTGTGCAC GCGCGAGGAA ACTTTCGGGC CGGTGGCGCC ATTGCTGCGC TTCGGTTCCG AGGAAGAGGC CCTCGCAATC GCCAACGCCA CCGAGTATGG ACTCGCCGCC TATTTCTACA CCCGCGACCT GGCCCGCGCC TTCCGCGTCG GCGAAGCACT GGAATACGGC ATGGTCGGCA TCAACACCGG CATGCTCTCC TATGACGTCG CACCCTTCGG CGGCGTCAAG CAGTCCGGCA TCGGCCGGGA AGGTTCGCAC CATGGCATGG ACGAATACCT GGAACTCAAA TACCTCTGTC TAGGCGGGAT GGCGCCATCC GCCTGA
|
Protein sequence | MSHELRLDQP GLLRTRCLID GQWVDADHSK TFSVTDPATG RALADVPAMG AAETMRAIAA AEHAWTGWRG KTAKERAAVL RRWYELILSH TEDLARILTA EQGKPLTEAR NEIGYAAGFV EWFAEEAGRA YGETIPSPVP DKRLLVIRQP IGVCAAITPW NFPAAMITRK IAPALAAGCT VVVKPAEQTP LTALALADLA VQAGFPPGVI NVVTGDPEAI GGELTSNPLI RKLSFTGSTE VGRLLMAQCA ATVKKISLEL GGNAPFIVFE DADLDAAVEG ALLSKYRNTG QTCVCTNRFL IQDSIYDAFA ERLAAKVRRL EVGNGLDEGV VQGPLIDEQA LAKVERHIAD ALDRGARVLA GGGRHPLGGR FFQPTVLVDV TPEMLCTREE TFGPVAPLLR FGSEEEALAI ANATEYGLAA YFYTRDLARA FRVGEALEYG MVGINTGMLS YDVAPFGGVK QSGIGREGSH HGMDEYLELK YLCLGGMAPS A
|
| |