| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1737 |
|---|
| Symbol | pip |
|---|
| ID | 3102433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1854183 |
|---|
| End bp | 1855133 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637170898 |
|---|
| Product | proline iminopeptidase |
|---|
| Protein accession | YP_114176 |
|---|
| Protein GI | 53803927 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.146462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC TTTATCCACC GCTCGAGCCC TACGTCTTCC ACCGTTTCGG AGTGGGGGGC
GGGCATGAGA TCTATGTCGA GGAATGCGGC AATCCCGAGG GCATTCCCGC GGTGTTTTTG
CACGGGGGGC CAGGCTCTGG TTGCAGACAC CACCATCGCT CGTTTTTCGA TCCGGAACGT
TACCGGGCGA TACTCGTCGA TCAACGGGGC TGCGGGCGAT CGACCCCGCA TGGTGCGCTC
AGGAACAATA CCACCCGTCA TCTGATCGAC GACCTCGAAT CGATCCGAGG GCGCTTGAAT
ATCCCGAAAT GGCTGCTTTT CGGTGGCTCC TGGGGGGCGG CCCTGGCGTT GCTCTATGCG
CAGGCCTTTC CGGAGCGGGT GAGCGGGCTG ATCCTGAGGG GCAGTTTCCT GGCGCGCAAG
CGCGACGTGG ACTGGTTCGT GCGCGATGGT GCCAGTCGCT TCCATCCCGA GGCATGGCAG
CGGTTCAGTG ACAATTTCGA TGCCCGGGAG CGGGCCGATC CGGTCCGGGC TATCCACCGC
CGGATCAAAG GCGCCGATGA GCTTGAACAG CGGCGAATGG CGAAGGAATG GTGGCTTTGG
AGCAGCCGCG TCACGCTGGG TTCCGGGTTC AACCCGGCGG ATGATGATCC CCTTCCCCCC
GGAGCCTTGG CGCAGTGCCG CATCGAACTC CATTATGCGG CGGCCCGCTA TTTCATCAGG
GAAGGTCAGA TCCTCGAAGA CTGTCCGAAG ATCGCCCATC TGCCCGCGAT CATCGTGCAC
GGCCGGCAGG ACCTGGTCTG TCCTCCCGAG GCGGCCTGGC TGCTGCATCG GGCATTGCCG
CGATCCGAGT TGACGATTTT GCCGAACGCC GGTCATCTTG CCCAAGGCGA GGAAATGACC
GATGCTCTGG TGAGAGCGCT GGACGGCATG GCGGAACGGC TGGGGAGCTG A
|
|---|
| Protein sequence | MKPLYPPLEP YVFHRFGVGG GHEIYVEECG NPEGIPAVFL HGGPGSGCRH HHRSFFDPER
YRAILVDQRG CGRSTPHGAL RNNTTRHLID DLESIRGRLN IPKWLLFGGS WGAALALLYA
QAFPERVSGL ILRGSFLARK RDVDWFVRDG ASRFHPEAWQ RFSDNFDARE RADPVRAIHR
RIKGADELEQ RRMAKEWWLW SSRVTLGSGF NPADDDPLPP GALAQCRIEL HYAAARYFIR
EGQILEDCPK IAHLPAIIVH GRQDLVCPPE AAWLLHRALP RSELTILPNA GHLAQGEEMT
DALVRALDGM AERLGS
|
|---|
| |