Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1734 |
Symbol | alr |
ID | 3102895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1850205 |
End bp | 1851284 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637170895 |
Product | alanine racemase |
Protein accession | YP_114173 |
Protein GI | 53803938 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGCCCG CAGCCCGTGC CGTCCTGGAC ATGGCGGCCT TCGCCCACAA TTTCGCCTGG ATTCGCGCCG CCGCGCCGGA TTCGAAAATC ATGGCCGTGA TCAAGGCCAA CGCCTACGGG CACGGACTGA TCCGGGCCGC GCGAGCGCTG CCGGCAGCGG ATGCGTTTGC CGTGGCGCGG GTGGAAGAGG GCATCGTTCT GCGTCAGGCC GGTATCGCTC AACGCATCGC CGTGTTGCAG GGTTATGGCG ACGAAGAAGG GATGAGGCTG AGCGCCCGCC ATGGTCTCGA ACCGGTGATC CATTCCGGCT TCCAGCTTGA TCTGCTGGAG CGGCTCGATA CTTCCGTCCC AATGGGGGTG TGGCTCAAGG CGGACAGCGG GATGCATCGG CTGGGTCTGG CCGACGAGGA GTTCGCCCGG GCGCGGTTGC GGCTGGCGCG GATGCCTCAG GTGCGCCAGC CGGTGCCTGT CATGACCCAT CTGGCCAATG CCGACGCCAC CGATGATCCG ACCACCGAAA TCCAGCTGCG TTGTTTTGGG CGGATGGCAG GCGGGCGGGG CGAATTCAGC ATCGGCAACT CGGCGGGGTT GATGGCCTGG GCGGCGGCCC GCAGTGCCTG GGTCAGGCCC GGCATCCTGC TGTATGGCGT ATCGCCGTTT CCTGGACGGA GCGGACCGGA AGAAGGTTTG ATGCCGGTCA TGACCTTGCA GAGCCGCCTG ATCGCGGTCA AGCAACTGAA GACCGGCGAT GCGGTTGGAT ACGGCGGCGA CTTCATCTGC CGCCGCCCGA CCCGCATGGG CATCGCGGCC ATAGGCTACG GCGATGGTTA CCCCCGCCGC GCGGCCACCG GCACGCCGGT GCTGGTCCGG GGCAGGCGCG TGCCGCTGAT CGGCCGGGTC TCGATGGACA TGATATCGGT CGATCTGACC GACTGCCCGT CGGCGGAAAT CGGCGATACC GTGACGCTAT GGGGACAAGG GCTGCCGGTG GAGGAAATCG CGCTTCACGC CGACACCATT CCCTACGTGT TACTGTGCAA TGTCACCCAG CGGGTGAACA TGGTGGAGAC AGTCGCCTGA
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Protein sequence | MVPAARAVLD MAAFAHNFAW IRAAAPDSKI MAVIKANAYG HGLIRAARAL PAADAFAVAR VEEGIVLRQA GIAQRIAVLQ GYGDEEGMRL SARHGLEPVI HSGFQLDLLE RLDTSVPMGV WLKADSGMHR LGLADEEFAR ARLRLARMPQ VRQPVPVMTH LANADATDDP TTEIQLRCFG RMAGGRGEFS IGNSAGLMAW AAARSAWVRP GILLYGVSPF PGRSGPEEGL MPVMTLQSRL IAVKQLKTGD AVGYGGDFIC RRPTRMGIAA IGYGDGYPRR AATGTPVLVR GRRVPLIGRV SMDMISVDLT DCPSAEIGDT VTLWGQGLPV EEIALHADTI PYVLLCNVTQ RVNMVETVA
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