| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1683 |
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| Symbol | |
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| ID | 3103290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1796796 |
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| End bp | 1799357 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637170847 |
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| Product | sensory box protein |
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| Protein accession | YP_114126 |
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| Protein GI | 53804038 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAGC CCTCCCTGGC GCGACAGGAG TTCCCGCGGG CCCTGCTGGA CGCCTTCGAC
GAGGCGCTCT GCCTGGTGGA TTCCGCCGGC AGTCTCGTGG AAATGAACGC AGCGGCGGAA
CGCCTCTTGG GCTGCGGCCG CCGGGCTCTG GTGGGGAAAA AATTCTTGCC GGCGCCGGTG
TCGGGGGCAT CGGCGCGGCG GATGCGGGTC AGCCTGGGGA GCGGGAAAGA CCGGCTACTC
GAAGGCGAAA TTCGTCCACT GGCCGGCGCC GGCAGCGCGA TCAGCCTGGT GCGTCTGTCC
GACCCCGCGT TGGAGAGTGG CCGCGGCCGG GACAGCGAAG CGACCCTGCG GGCCGTGCTC
GATACGCTGG TCGACGGCAT CATCGTCATC GACGAGCAGG GCCTCGTCCA GTTGTTCACA
CCCGCCGCGG CGCGCATGTT CGGCTACCAT GCGGACGAGG TTCTCGGCCG CAATGTGGCG
CTGCTGATGC CCTCGCCCCA CCGAGAGGAA CACGACGCCT ATATCGGTCG TTACCTTCGC
ACCGGTGAGC CCCGGATCAT TGGGATCGGG CGGGAGGTCC AGGGGCGCCG GAAGGACGGC
CGACTGTTTC CGCTCCATCT GTCCGTCGGC GAGTTTCGCC GGCACCAACG CCGCTGGTTC
GTCGGCGTCA CCCGCGATCT CACCGTGAGA AAACAGACCG AAGACCGGCT ACTCATGCTC
TCCAGTGCCG TCGACCAGAG CCCTTCGGGG GTATTGATCG CCGATTCTCA GGGCTGCATC
CAGTATGTGA ATCGCGGTTA CACGACGCTC ACCGGCTACG GAGCCGAGGA ACTCGTGGGC
ACGCGCTGCA GCGGTGCGGG GAGGGCGGAC CGGTTGGGAC GCCTGCGCGA GGTTATTCGG
TCGGGCACCG CCTGGCGCGG CGAGGTCCAG GACAGGAGGA GGAACGGGGA GGTTTACTGG
GCGCTCGAAA GCATCACCCC GATCCTGGAT GGTCACGGCG AAGCGACCCA CTATCTCCTG
ATCCAGCAGG ACATCACCGA ACAGAAGCGG GACAAGGAAG CGCTCGCCGA GAGTGAGGAG
CGATTCCGGC AGGTAGCCGA GATGGCGGGA GAATGGCTCT GGGAGCAGGA CCCCGAAGGA
CGTTACCTCT ACAGCAGCGC TGCGGTCCGG GCCATCCTCG GTTTCGAGCC GGAAGAGGTG
CGCGGCAAAC ATTACTTCGA CCTGTTGACG CCGGAGGACA GGCAGCACTG GATGAGCGCC
CTCCCACCGG CCAAGGCGAG CGAAAAGCCG TTCTTCCGTC TCATCAACCG CTATCGCCAC
AAAGACGGCC ACGAGGTCTA CACCGAATCC ACCGGAGCGC CGATCTTCGG TGAGCGGGGC
GAACTCGTCA AATGGCGGGG CGTCGACCAC GACATCACCA CCCGCAAACG CTATGAGGAT
GAGCTGCGGG TGCGCAACCG TGCGATCGAG TCGGCGAGTG TGGGCATCAA CATCGCCGAT
GCACAGACCA AGGGATTGCC GAACGTTTAC ATCAATCCGG CACTCAGCGC CATCACAGGC
TATTCCAAGG AGGAGCTCCT GCATCACAGC ATGCGGATGC TGCAGGGAGC CGGGACCGAT
CCGGCGAGTG TCGAAGAAAT CCGCGAGGCG ATCCGGGCAG GCCGGTCGTG CCGGCTGACG
ATCAGAAACT ACCGCAAAGA TGGCACGCCA TTCTGGAATG AACTGCTTAT TTCCCCGGTG
AAGGACGAGG CTGGCGTCAT CACCCACTAT ATCGGGATCC AGACGGATGT GACCGAACTC
CGCCGCGCGG AGGAGGAGCG GCACGAACTG GAAATCGCCA AGCAGATCCA GCTGTCACTG
CTTCCGAAGG CCCCGCTGCA TCTGACGACG GTCGAGATCG CCGGCTTTTG CGTGCCCGCG
ACTCACGTGG GGGGCGATTA TTTCGATTAT TTTCATCGCG GCGACTGTGT GGATCTGGTC
ATCGCCGACG TTTCCGGCCA CAGCGTCGGT GCGGCGCTCA TCATGGCGGA GGTGCGCAGC
GTGTTGCGGA CGGAGGCGCG CAGGACACCG GTGGAACCGT CCGGCGGCGA AGGTGTCGCT
CCGATTCTCG CCGGCATCAA CGACGCGCTG CACGAGGATC TGTCGGGGGC GGACCTGTTC
ATTACGATGT TCTATGTCCG CTACGATTGC AGGACCCGCA GGCTCAGCTA TGCCAACGCG
GGGCACAACT TCGCGCTGCT CCTCCCAAGC GGGGAGGACA GCTGCGTCCC TCTGGACGCG
GACGGTCTGG TCCTGGGCGT CAGAAAAGGC GTGTCCTTCG AGGAAAAGGC CGAGAATTTG
AAGGCCGGGG ACTGGCTGTT GCTCTACACC GACGGGGTGA TCGAGGCACA GAACGGCGAA
GGGGAGTTTT TCGGCATCGC CCGGCTTTGC CGCCAGTTTT CGGCACGCCG TTCACTGTCG
CCGGAAGCGA TGGTCGCCGG GCTCCTGAGC GAACTTCGGG CGTTCGCCGG GAACGATCCG
CTGCGCGACG ACGTCAGCAT GGTGGCACTC CGGGTGCGCT GA
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| Protein sequence | MKEPSLARQE FPRALLDAFD EALCLVDSAG SLVEMNAAAE RLLGCGRRAL VGKKFLPAPV
SGASARRMRV SLGSGKDRLL EGEIRPLAGA GSAISLVRLS DPALESGRGR DSEATLRAVL
DTLVDGIIVI DEQGLVQLFT PAAARMFGYH ADEVLGRNVA LLMPSPHREE HDAYIGRYLR
TGEPRIIGIG REVQGRRKDG RLFPLHLSVG EFRRHQRRWF VGVTRDLTVR KQTEDRLLML
SSAVDQSPSG VLIADSQGCI QYVNRGYTTL TGYGAEELVG TRCSGAGRAD RLGRLREVIR
SGTAWRGEVQ DRRRNGEVYW ALESITPILD GHGEATHYLL IQQDITEQKR DKEALAESEE
RFRQVAEMAG EWLWEQDPEG RYLYSSAAVR AILGFEPEEV RGKHYFDLLT PEDRQHWMSA
LPPAKASEKP FFRLINRYRH KDGHEVYTES TGAPIFGERG ELVKWRGVDH DITTRKRYED
ELRVRNRAIE SASVGINIAD AQTKGLPNVY INPALSAITG YSKEELLHHS MRMLQGAGTD
PASVEEIREA IRAGRSCRLT IRNYRKDGTP FWNELLISPV KDEAGVITHY IGIQTDVTEL
RRAEEERHEL EIAKQIQLSL LPKAPLHLTT VEIAGFCVPA THVGGDYFDY FHRGDCVDLV
IADVSGHSVG AALIMAEVRS VLRTEARRTP VEPSGGEGVA PILAGINDAL HEDLSGADLF
ITMFYVRYDC RTRRLSYANA GHNFALLLPS GEDSCVPLDA DGLVLGVRKG VSFEEKAENL
KAGDWLLLYT DGVIEAQNGE GEFFGIARLC RQFSARRSLS PEAMVAGLLS ELRAFAGNDP
LRDDVSMVAL RVR
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