Gene MCA1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1669 
Symbol 
ID3102115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp1772860 
End bp1773942 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID637170831 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_114112 
Protein GI53804232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCTT TCAACGTCCG GCCCTCGAGC CGCGATCTCG CCGGGGCAGT AGCGATACCG 
GCCGATGTTC GGCCATTCCG GCACCGTCTG AGTGTGGCAC CGATGATGGA CTGGACCGAT 
CGGCATTGCC GCTTTTTCCT TCGGCTGATT TCCCGCCATA CCCTGCTCTA TACCGAGATG 
GTGACGACCG CCGCTATCCT CCATGGCGAC CGGGAGCGGC TCCTTGGCTT CCATCCGGCG 
GAGCACCCGC TGGCGATCCA GCTCGGCGGC AGCGATCCCG AGGCTCTGGC CGAATGCGCA 
AAAATCGCGG AATTCAGGGG ATTCGACGAA GTCAATCTCA ACGTTGGCTG TCCCAGCCCC 
CGTGTCCAGA CCGGCCGCTT CGGCGCCTGC CTGATGGCCG AACCGGAGCG CGTGGCCGAC 
TGTGTCCGCG CCATGTGCGA GGCCGTCTCG GTGCCGGTCA CCGTCAAGAC CCGCATCGGC 
ATCGACGACC GCGACTCTTA CGAAGACCTG CTTCATTTCG TGACGATCGT TGCCGAAGCC 
GGCTGCCGCA CTTTCATCGT CCACGCCCGC AAAGCGTGGC TGCAAGGTCT TTCACCCAAG 
GAAAACCGCC AAACCCCGCC ACTGCGCTAC GACGTGGTCC GCCGGCTCAA GTCCGAGCTA 
CCGGAACTCG CGATCGTGCT GAATGGCGGT ATCCAGACGC TGGACGAAGC CGAACGGCAC 
CTGTCGTGGT GTGATGGCGT CATGATAGGT CGAGCCGCTT ATCACAACCC CTACCTTCTT 
GCCGAGGCCG ACCGCCGTTG CTACGGGCAC AGCGACGTCA GGCCCCGAAC CCGGGAGGAG 
GTCATCGAAG ATTTTATGCC CTACGTCCGG AACGAACTCT CCAAAGGTAG CCGGCTGCAT 
GCCCTCACGC GACATATCCT GGGCCTTTAT CATGCAACGC CAGGGGGGAA ACGCTGGCGT 
CGGCACATCA GCGAAGGCGC CTCCCGGCGG GGCGCCAGCG AGGCACTGCT GCTGGAGGCC 
GCGCATGCAC TCGGCGCGAA CGGCCTTCGC GGAAACCAGG GCCGGCAGGG CTCGTTCACT 
TAA
 
Protein sequence
MSAFNVRPSS RDLAGAVAIP ADVRPFRHRL SVAPMMDWTD RHCRFFLRLI SRHTLLYTEM 
VTTAAILHGD RERLLGFHPA EHPLAIQLGG SDPEALAECA KIAEFRGFDE VNLNVGCPSP 
RVQTGRFGAC LMAEPERVAD CVRAMCEAVS VPVTVKTRIG IDDRDSYEDL LHFVTIVAEA 
GCRTFIVHAR KAWLQGLSPK ENRQTPPLRY DVVRRLKSEL PELAIVLNGG IQTLDEAERH 
LSWCDGVMIG RAAYHNPYLL AEADRRCYGH SDVRPRTREE VIEDFMPYVR NELSKGSRLH 
ALTRHILGLY HATPGGKRWR RHISEGASRR GASEALLLEA AHALGANGLR GNQGRQGSFT