Gene MCA1654 details

Gene Information

• Locus tag: MCA1654
• Symbol: nusB
• ID: 3102427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1757827
• End bp: 1758423
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170816
• Product: N utilization substance protein B
• Protein accession: YP_114097
• Protein GI: 53804263
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00612472
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTGG CGCGGACACT GGCGCGCCGT GCCGCCGTGC AGGCCGTCTA CCAGTGGCAA 
CTGGCGCGGG ACAGCCTGCC GGACATCGAA CGCCAGTTCG TCGAGGAGTT GCAGCTAGCC 
AAGTCGTTGT ACCGGCGCCA TGCCGAGGGT TTTGAACTGA GTCCGCCCGA ACGGGAACAA 
CTCGAGGAGT TGCTGGAGAA GTTTGGCCGT TCCCAAGGGA CGGACGAGGT CGAGGAAGAG 
GATGTGACGC TGGAGCAGCG GGCCAGTCAA TGCCAAGTGC CCGACGTCCA GGTCGGCTAT 
TTCAAGGAGC TCCTCCATGG CGTGGCGAAC AATCTGGCCC TGCTGGATGC CGCGCTGGCG 
AAATACCTCG ATCGTCCCAT CGATGAAGTC GATCCGGTGG AGCGAGCGAT CCTTCGCATC 
GGTTGCTACG AATTCATGCG CCGGCCGGAG ACGCCGTACC GGGTGATTCT GAACGAGGCC 
ATCAATCTGG CCAAGGAATT CGGCGCTGCC CAGAGCTATC GTTATGTGAA CGGCATCCTC 
GACCGGGTGG CGCACGAATG CCGGGCGGTC GAAATGGCGG CCCGCCGACG GGGATGA 

 

Protein sequence

MSLARTLARR AAVQAVYQWQ LARDSLPDIE RQFVEELQLA KSLYRRHAEG FELSPPEREQ 
LEELLEKFGR SQGTDEVEEE DVTLEQRASQ CQVPDVQVGY FKELLHGVAN NLALLDAALA 
KYLDRPIDEV DPVERAILRI GCYEFMRRPE TPYRVILNEA INLAKEFGAA QSYRYVNGIL 
DRVAHECRAV EMAARRRG