Gene MCA1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1623 
Symbol 
ID3104228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1728542 
End bp1728946 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID637170786 
Productvirulence associated protein VagD, putative 
Protein accessionYP_114068 
Protein GI53804323 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACC TGCTCGATAC CAACATCTGC ATCTATCTGA TGCACCGGCA GCCCCCGGCG 
CTGGCTTCAC GATTCCGTGC ACTTACGGTC GGGGATGTCG GCATTTCGGT CATTACCTAC
GCTGAGCTTC GGGTCGGGAT CGAGAAGCTG ACGGATACGC GCCAGCACAA CGAGCGGGTT
CTGGAGTTGT TCCTCAAGCG GGTGCCGTTC CTGCCTTTCG ACGAGGGCGC CGCGCTCGCC
TACGGGACTT TGCGCGCCGC GGTGCCGGAT CGCCGCCGCA ATGCCTTGGA TCGCTTGATC
GCCGCGCACG CCGTAAGCCT GGGCGCTGTC CTGGTCACCG ACAATGAGGC CGATTTCACC
GGCTATCCGG GCTTGGCGGT CGAAAATTGG ACGCGCGGAT CGTGA
 
Protein sequence
MKYLLDTNIC IYLMHRQPPA LASRFRALTV GDVGISVITY AELRVGIEKL TDTRQHNERV 
LELFLKRVPF LPFDEGAALA YGTLRAAVPD RRRNALDRLI AAHAVSLGAV LVTDNEADFT
GYPGLAVENW TRGS