Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1623 |
Symbol | |
ID | 3104228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1728542 |
End bp | 1728946 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170786 |
Product | virulence associated protein VagD, putative |
Protein accession | YP_114068 |
Protein GI | 53804323 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTACC TGCTCGATAC CAACATCTGC ATCTATCTGA TGCACCGGCA GCCCCCGGCG CTGGCTTCAC GATTCCGTGC ACTTACGGTC GGGGATGTCG GCATTTCGGT CATTACCTAC GCTGAGCTTC GGGTCGGGAT CGAGAAGCTG ACGGATACGC GCCAGCACAA CGAGCGGGTT CTGGAGTTGT TCCTCAAGCG GGTGCCGTTC CTGCCTTTCG ACGAGGGCGC CGCGCTCGCC TACGGGACTT TGCGCGCCGC GGTGCCGGAT CGCCGCCGCA ATGCCTTGGA TCGCTTGATC GCCGCGCACG CCGTAAGCCT GGGCGCTGTC CTGGTCACCG ACAATGAGGC CGATTTCACC GGCTATCCGG GCTTGGCGGT CGAAAATTGG ACGCGCGGAT CGTGA
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Protein sequence | MKYLLDTNIC IYLMHRQPPA LASRFRALTV GDVGISVITY AELRVGIEKL TDTRQHNERV LELFLKRVPF LPFDEGAALA YGTLRAAVPD RRRNALDRLI AAHAVSLGAV LVTDNEADFT GYPGLAVENW TRGS
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