| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1618 |
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| Symbol | vsr |
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| ID | 3104736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1725503 |
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| End bp | 1725928 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637170782 |
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| Product | DNA mismatch endonuclease, vsr |
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| Protein accession | YP_114064 |
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| Protein GI | 161579538 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.465937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGATA CGCTCAGCCA AGAGGAGCGT AGCGCGCGAA TGCGCGCCAT ACAGCCGCAC
GGCACCAAGC CGGAGCTAGT TGTCAGGCGC GCGCTTCGTC AGCTTGGCTA TCCAGGGTAT
CGACTGCATC CAAAAGGCTA TCCTGGCAGG CCAGACATAG CTTTCATAGG GCGAAAGAAA
GCAATCTTCG TGCACGGGTG CTTCTGGCAC CGGCACGATT GCAGGCTCGG AAGACGCTTG
CCCAAGTCAA ACTTGAGCTA CTGGCTGCCC AAGCTCGAAC GCAACATGGA ACGCGACAAG
GAGGCGCTTG CGCGGCTTGC CGCCGCCGGG TGGGATGTGC TGGTGATATG GGAATGCGAG
ACGAAGGACG CCGAAGCCCT TGCGAGAACG CTAACGGGCT TCCTTGGCAC CCCTCGCACG
CCATGA
|
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| Protein sequence | MVDTLSQEER SARMRAIQPH GTKPELVVRR ALRQLGYPGY RLHPKGYPGR PDIAFIGRKK
AIFVHGCFWH RHDCRLGRRL PKSNLSYWLP KLERNMERDK EALARLAAAG WDVLVIWECE
TKDAEALART LTGFLGTPRT P
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