Gene MCA1603 details

Gene Information

• Locus tag: MCA1603
• Symbol: hypD
• ID: 3102531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1709742
• End bp: 1710842
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637170771
• Product: hydrogenase expression/formation protein HypD
• Protein accession: YP_114053
• Protein GI: 53804352
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0409] Hydrogenase maturation factor
• TIGRFAM ID: [TIGR00075] hydrogenase expression/formation protein HypD

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACG CACGGCTTTG GCTGGAGCGG ATCAGGGAGC TGCCGATTCC GGACGGTATC 
CGCATCATGA ACGTCTGCGG CGGGCACGAG CGCTCGATCA GCATGGCGGG ATTGCGTACC 
GCCCTGCCGC CCGCCATCCG CCTGATCCCC GGCCCCGGCT GCCCGGTCTG CATCTGCCCG 
GAGGAAGACA TCTATCAGGC CATCCGGCTC GGTCTCGAGG GCGAGGCCGT CGTCGCCACC 
TTCGGCGACA TGCTGCGGGT GCCGGTCAAC CTCGGGCGCC AGGCCGTGCG CACGCTGGAA 
CAGGCCAAGG CGGCAGGCGC CGACATCCGG CCCATCGCCT CGCCCATCGA GGCACGGATC 
ATCGCCGAAA AGGCGGCCGG CAAGCCGGTG GTACTGTTCG CGGTCGGCTT CGAGACCACC 
ATGGCGCCGG TCGCCGCCCT GATGGCCGAA GGACTGCCCG ACAACCTCTA CATCCTGTGC 
AGCGGCCGGT TGACCTGGCC GGCGGTCAAG CTGCTGCTCG ATTCCGACGA ATGCGTGCTG 
GACGCCCTGG TCGCGCCCGG CCACGTGGCC ACGGTGATGG GGCCGGAAGA ATGGGCCTTC 
GTCGCCGACG ACTACCGCTT GCCGGTGGCG ATCGCCGGCT TCACCCCCGC CAGCCTGCTC 
CGGGCCATCC ACTCGACGAT CGTCCAGTGG CTGGAGGAAA CGCCGCGGCT GGACAATTGC 
TATCCGGAGG CGGTGAAGCC GGGGGGCAAT CCGAAGGCTC GGGAATTCCT GGACCGCAGC 
TTCGACGTCG CCGCCGGCAA CTGGCGCGGC ATCGGGCCGA TCGCGGCTTC GGCCTACGCG 
CTGAAGCCGG GATTCGCCGC GCACGACGCC CGCCTGCATT TCCCCGACTA CGACGCGGGC 
GACCGGCGCC ATGCCGGCGA GATGCCGGCG GGCTGCGACT GCGCCCGCGT CGTGCTCGGC 
AGGATCCAGC CGGACGAGTG CCGCATCTAC GGCAAACCCT GCAGCCCCCG CAGCCCGGTC 
GGGCCCTGCA TGGTCTCGGA CGAAGGCGCC TGCCGGATCT GGTGGGCGGC CGGCGTGCGC 
AAGGACTCCG CCGCCGCCTG A 

 

Protein sequence

MSDARLWLER IRELPIPDGI RIMNVCGGHE RSISMAGLRT ALPPAIRLIP GPGCPVCICP 
EEDIYQAIRL GLEGEAVVAT FGDMLRVPVN LGRQAVRTLE QAKAAGADIR PIASPIEARI 
IAEKAAGKPV VLFAVGFETT MAPVAALMAE GLPDNLYILC SGRLTWPAVK LLLDSDECVL 
DALVAPGHVA TVMGPEEWAF VADDYRLPVA IAGFTPASLL RAIHSTIVQW LEETPRLDNC 
YPEAVKPGGN PKAREFLDRS FDVAAGNWRG IGPIAASAYA LKPGFAAHDA RLHFPDYDAG 
DRRHAGEMPA GCDCARVVLG RIQPDECRIY GKPCSPRSPV GPCMVSDEGA CRIWWAAGVR 
KDSAAA