Gene MCA1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1600 
SymbolhypC 
ID3102409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1708260 
End bp1708496 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content67% 
IMG OID637170768 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_114050 
Protein GI53804355 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCTCG CCGTACCGAT GCAGATCACC CGGCTCGACG GCTTTTCCGC GCGCTGCACG 
GCGCGCGGCG TCGAGCGGGA GGTCAGCCTG TTCATGCTGC AGGACGAAGG CGTCGCCCCC
GGTGACTTCG TCCTGGTCCA TGTCGGCTAC GCCATCCAGA AGATCAGCCG GGAGGATGCC
GAGGCGACCT GGGAGCTGTT CGACCAGATC CTCGCCGCGG GCGATGCCGA TGCATGA
 
Protein sequence
MCLAVPMQIT RLDGFSARCT ARGVEREVSL FMLQDEGVAP GDFVLVHVGY AIQKISREDA 
EATWELFDQI LAAGDADA