Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1599 |
Symbol | |
ID | 3103410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1706633 |
End bp | 1708147 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637170767 |
Product | serine protease, MucD, putative |
Protein accession | YP_114049 |
Protein GI | 53804357 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.210077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCATCC AGCGGCAAAC GCCGCTGATT CGTGAGGAAG AAACCGCCAT GCCAAAAAAC GTCATGCTTT CCGCCCTGAT CGCCGCCTCC ATCCTCGCCG CCATGGGCGC TGGATATGTC CGCTACGGCG GCTACACCCT GGTGCCCAAA TCGGATCTCA TGCAGCCGCC CCCGCAGACG CCCCAACTGC CGGAGGCCGC AGCCCGTGCC ACGCCGTCTC TGCCCGATTT CGCCGCCATC GTCCGGCGTA ATGGACCGGC GGTCGTCAAC ATCAGCGTCA CCGGCACCAG CCGGGTCAAT CTGCCGGAGA TGCCCCAGTT CGACCCCAAT GATCCGTTCG GGGAATTTTT CCGGCGGTTC CAACCGCAGA TTCCCCGTGG CGAGGATGCT CCCGCGCACG GACTGGGCTC GGGATTCATC ATCCGTCCCA ATGGCCTGAT CCTGACCAAC GCCCATGTGG TCAACGGCGC CCAGGAAGTC ACGGTGAAGT TGAATGACCG GCGCGAATTC AAGGCCCGGA TCATCGGTAT CGACAAACCC ACCGACGTCG CCCTGCTCAA GATCGAGGCC GACGGTCTGC CGGTGGTGCC GCTGGGAGAT CCCGCGCGAT CCGGGCCCGG CGACTGGGTG GTGGCGATCG GCTCGCCGTT CGGTTTCGAA AACAGCGTGA CGGCGGGCAT CATTTCGGCG AAATCGCGCA GCCTGCCCGA GGAAACCTAT GTGCCGTTCA TCCAGACCGA TGTCGCCGTC AATCCGGGCA ACTCCGGCGG CCCGCTGTTC AATCTGAGCG GCGAAGTCAT CGGCATCAAC TCGCAGATCT ACAGTCGCAC CGGCGGCTAC CAGGGCCTGT CGTTCGCCAT CCCCATCGAT GTCGCGCTGA AGGTCGAAAA GCAGCTGCTG GCGGACGGCA AGGTCAGCCG AGGACGGCTC GGCGTCGGCA TCCAGGAATT GAACCAGTCA CTGGCCGAAT CCTTCGGGCT GGATCGCCCG ACGGGCGCCC TGGTCGATTC GGTGCCCAAC GACGGGCCGG CGGCCAAGGC CGGTATCAAG CCGGGCGACG TCATCCTGAG CCTCAACGGC CAGCCGATCG AAAATTCCGG CCAATTGCCG CCACTGGTTG CGGACATCAA GCCAGGCAGC GAAGCGAAGG TGGGCATCTG GCGTAACGGC AAGCGCGAGG AGATCACGGT CCAGGTCGGC GAAATGCCGG ACACACAGCA GGCCGCCGCG ACCGGCAACG GGCTGGCCAA GGGCCGGCTG GGGCTGGCGG TGCGGCCCCT ATCGCCGGAA GAACAGCGGG CGGCCGACGT CGACGGCGGT GTGCTGGTCG AGGCGTCCGC GGGCCCGGCC GAACGCGCCG GCATCCGGCC GGGCGACGTG ATCCTCGCAC TCAACGGCCA TGCGGTGGCC AATCCCGGCG AGCTGCGCGA ACTGGCGGAC CGGGCCGACA AGCACGTGGC CCTGCTGGTG CAGCGCGGCG GTACGAGGAT TTTCGTGCCG CTGGATTTGG GCTGA
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Protein sequence | MFIQRQTPLI REEETAMPKN VMLSALIAAS ILAAMGAGYV RYGGYTLVPK SDLMQPPPQT PQLPEAAARA TPSLPDFAAI VRRNGPAVVN ISVTGTSRVN LPEMPQFDPN DPFGEFFRRF QPQIPRGEDA PAHGLGSGFI IRPNGLILTN AHVVNGAQEV TVKLNDRREF KARIIGIDKP TDVALLKIEA DGLPVVPLGD PARSGPGDWV VAIGSPFGFE NSVTAGIISA KSRSLPEETY VPFIQTDVAV NPGNSGGPLF NLSGEVIGIN SQIYSRTGGY QGLSFAIPID VALKVEKQLL ADGKVSRGRL GVGIQELNQS LAESFGLDRP TGALVDSVPN DGPAAKAGIK PGDVILSLNG QPIENSGQLP PLVADIKPGS EAKVGIWRNG KREEITVQVG EMPDTQQAAA TGNGLAKGRL GLAVRPLSPE EQRAADVDGG VLVEASAGPA ERAGIRPGDV ILALNGHAVA NPGELRELAD RADKHVALLV QRGGTRIFVP LDLG
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