| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1596 |
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| Symbol | |
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| ID | 3102708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1701580 |
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| End bp | 1702695 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637170764 |
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| Product | HlyD family multidrug efflux protein |
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| Protein accession | YP_114046 |
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| Protein GI | 53804055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.616153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCA TCGTGGCTGC GATCACTCTG CTCCAAGTCG CCGGCTGTGG CGGCGGCGAA
AGCGGCATGG CGGGCCTGCC GACACCGAAG GTGGAGGTGA GCCAGCCGGT GCAGCGGGAA
ATCCTCGAAA CGGACGAGTA CACCGGACGG CTGCAGGCGG TGGAATCCGT GGAGGTCCGT
GCCCGGGTTT CCGGTTACCT CGAACAAATC CTTTTCGCCG ACGGCAGCCG GGTCAAGAAA
GGCGATCTGC TGTTCGTCGT CGACCCCCGG CCCTATGTGG CGCAACTCCA GCAGGCGCAG
GCCGGACTCG AGCGGGCCCG ATCGAGGCTC AAGCTGGCCC GGAACCATCT GCAGCGGGCC
GAGAGTCCAC TGAAGGAGCA GGCGATTTCG GAAGAGGAAT ACGACACCCG CCGCCAGAGC
CTGGTGCAGG CTCTGGCCGA CGTCGAATCG GCCCGGGCGG AGGTCGATCT GGCCCGGCTC
AACGTCGAGT TCACCCAGGT CCGCGCGCCC ATCGACGGAC GCATTTCCCG CAAGCTCCTC
ACAGCAGGCA ACCTGGTCAC GGCGGATACC ACGGTGCTGG CCGGCATCGT CTCGGTCGAT
CCGATGTACG TCTATTTCGA CGCCGACGAA CGCGCCCTGC TCAAGTACCG CCGACTGGAA
CTGGCTGGCG AGCGCAAGGA TGGAATGCCG CTTGAAATGG GACTGCTGGA CGAACAGGGT
TATCCGCATC GCGGGTATCT CGATTACGTC GATCCGGAGG TCAACGCGGA GATGGGCACC
GTGCGTGCCC GCGGTGTCAT CCCCAATCCC GACGGGTTGA TGGAGCAAGG GCTGTTCGCC
AGAGTCCGGA TTCCCGGCGG CAGCCGCCAC CAGGGTCTGC TCATCCCCGA CCGCGCGATC
GCGATGGATC AGGGCAAGAA GTACGTGATG GTCGTGACCG CCGATAACCG TGCGGAATAC
CGCCCCGTTG TGACCGGGCG GCTGTACGAT GGCCTGCGCA TCGTCTCGGA TGGCCTGTTG
CCCGAAGACT GGGTCATCGT CAACGGGCTT CAGTTCGTGC GGCCCGGCAC GCCGGTCGAT
GCGACCCGCA TCGACATGCC GGAGGCGGCT CGATGA
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| Protein sequence | MARIVAAITL LQVAGCGGGE SGMAGLPTPK VEVSQPVQRE ILETDEYTGR LQAVESVEVR
ARVSGYLEQI LFADGSRVKK GDLLFVVDPR PYVAQLQQAQ AGLERARSRL KLARNHLQRA
ESPLKEQAIS EEEYDTRRQS LVQALADVES ARAEVDLARL NVEFTQVRAP IDGRISRKLL
TAGNLVTADT TVLAGIVSVD PMYVYFDADE RALLKYRRLE LAGERKDGMP LEMGLLDEQG
YPHRGYLDYV DPEVNAEMGT VRARGVIPNP DGLMEQGLFA RVRIPGGSRH QGLLIPDRAI
AMDQGKKYVM VVTADNRAEY RPVVTGRLYD GLRIVSDGLL PEDWVIVNGL QFVRPGTPVD
ATRIDMPEAA R
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