Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1595 |
Symbol | |
ID | 3102709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1699953 |
End bp | 1701515 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637170763 |
Product | multidrug efflux system outer membrane subunit |
Protein accession | YP_114045 |
Protein GI | 53804056 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCT TGAATCAGCC GGCTAATCAC AATCCGGGCG GCGAAAACAG CCAGCGCTTC GCAGGGCTCC TCCCCGCTGG AGACCATGGC CACGGCAGAG CCGCGCACCG GATCCTGCGC CTTTTTGCAT CCCTGCTCGG CGCGGTGTTC ACCGCCTGTT CGCCGGTGGG TCCGGACTAC CGGCGCCCGG ACACGACGAT GCCGGAACGC TGGCACGAAG CCGAGCCGCC GCCGGCGGCC CCGTCGGAAA CGGTCGGCGC GGATTGGTGG AAAGCCTTCG GCGATCCGGT ACTGAACCGC TTGATCCGGG AGGCGATGGT CGCCAACCTG GATCTCAAGC AAACCTACAC CCGCATCCGC GCCGCCCGGG AACAACGGAT CGTCGCCATC GCGAACGGTC TGCCGATCGT CTCCAACAAG GAGAGCGTGA GCCGGCGCCT CAACAATGCC GGCCAGAGTG GCGCGGGTGG ACAGCCCGGC GGCGTCGGCT TCGGCAACAA CATCGACATC TTCCAGCTCG GCTTCGACGT GCAATGGGAG ATCGACCTGT TCGGCGGCAT CCGGCGCTCG ATCGAAGCGG CCGAGGCCAA CCTCGAAGCC GAGGTCGAAA ACAGCCGCGC GGTGCTGGTC ACGCTGCTGG GCGACGTGGC CCGCGCCTAC ATCGAAATGC GCAGCAACCA GCACCTGCTG AACGTCAGCC AGGCCAACCT CAAGCTCCAG CTGGAAACCG CGCGGCTCAT GCGCATCCGC TACCAGGCCG GCCTGTCGGA CTCGCTGGAA GCGGTTCAGG CCGAAGCGCT CGCCGCGCAG ACCCAGGCGC AGTTGCCTGT GTACGAGACG GCCCGCAAAC AGGCCATGCA CCAGCTCGAA CTGCTCCTCG GCAAGCCGCC CGGTGCCTTG CAGACCCTGC TCGATCCCGA GCAGCCGGTG CCGTCGGCGC CCGACCGTAT CCTGCTCGAC CTGCCCTCCG AGCTGCTGAG GCGCCGGCCA GACATCCGCC TGGCCGAGCG GCAACTGGCC GCCGCCACGG CTCAGGTGGG CGTTGCCACG GCTGATCTCT ATCCCAAATT CAACATCGCC GCCTTCCTCG GCTTCCAGAA CATGAAGATC ACCGACGTCA CCGCCTTGAG CAAATCCTGG TCGGCCGCCG GCACCTTGAC CACGCCGATA TTCAACTGGG GCAGGATCCG GGCCAACATC GACGCCAAGA AGGCCCAGCA GGAGCAGAGC TTCCTGGCCT ATCAATCCGC GGTGCTCGGT GCCTTGAAGG ACGTGGAAAA CTCCCTGGTC GCTTACGCCC AGGAAAAGGA CCGTCGGGCC GCCCTGGAGC AGGCGGTGGA ATCGAACCGG CTGGCGCTGA AGCTCTCCAA GGAGCGTTAC CGTTCCGGGC TCACCTCGTT CCTCAACGTT CTCGATTCCG AGCGGGCGGT TTACTCCGCC GAGAGCGACC TGGTGAGGAG CCAGGCATCC GTGGCCGCCG ATCTGGTGTC GCTGTACAAG GCCCTCGGCG GCGGCTGGGA GACCGCCCTG GTCGATTCGG GCAAGCTGGC CGGCGGAAGC TGA
|
Protein sequence | MKRLNQPANH NPGGENSQRF AGLLPAGDHG HGRAAHRILR LFASLLGAVF TACSPVGPDY RRPDTTMPER WHEAEPPPAA PSETVGADWW KAFGDPVLNR LIREAMVANL DLKQTYTRIR AAREQRIVAI ANGLPIVSNK ESVSRRLNNA GQSGAGGQPG GVGFGNNIDI FQLGFDVQWE IDLFGGIRRS IEAAEANLEA EVENSRAVLV TLLGDVARAY IEMRSNQHLL NVSQANLKLQ LETARLMRIR YQAGLSDSLE AVQAEALAAQ TQAQLPVYET ARKQAMHQLE LLLGKPPGAL QTLLDPEQPV PSAPDRILLD LPSELLRRRP DIRLAERQLA AATAQVGVAT ADLYPKFNIA AFLGFQNMKI TDVTALSKSW SAAGTLTTPI FNWGRIRANI DAKKAQQEQS FLAYQSAVLG ALKDVENSLV AYAQEKDRRA ALEQAVESNR LALKLSKERY RSGLTSFLNV LDSERAVYSA ESDLVRSQAS VAADLVSLYK ALGGGWETAL VDSGKLAGGS
|
| |