Gene MCA1592 details

Gene Information

• Locus tag: MCA1592
• Symbol: rluA
• ID: 3102819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1698383
• End bp: 1699021
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637170760
• Product: ribosomal large subunit pseudouridine synthase A
• Protein accession: YP_114042
• Protein GI: 53804068
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific
• TIGRFAM ID: [TIGR00005] pseudouridine synthase, RluA family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAGG TGGTTCACAC CGACGCTGCC TTGCTGGTGC TTTCCAAGCC CAGCGGCCTG 
CTGGCGGTAC CGGGGCGCGG TCAGGACAAA CAGGATTGCC TGAGCGCTCG GGTGCGCGCC 
CGCTATCCCG ACGCCCTCGT CGTGCACCGG CTCGACATGG CCACTTCGGG CCTGATGGTC 
ATGGCGCGCG GAATCGCGGT GCAGCGCATC CTCAGCCAGT CCTTCGCCCG GCGGGAAGTG 
CTCAAGCGCT ACGAAGCGCT CGTGCATGGC GTCCTGGAGA CACCGCCGGA AACAGAGAAC 
GGCTGGAGCA GCATCGATCT CCCCCTGCTG TCCGACTGGC CCAATCGCCC CTTGCAAAAG 
GTCGATCCTT TGCACGGCAA ACCCAGCCTG ACCCGCTGGC GAATCCTGGG TCATGAAGAC 
GGTGCCACCC GCGTGGAACT CGAACCGGTG ACTGGGCGAT CCCACCAGCT CCGGGTCCAT 
CTTGCCGCCC TGGGATATCC CGTGCTCGGT GATCCGCTGT ATGGGCACGA AGTGGCGAAA 
TCTCGTGCTG GAAGACTGCT GCTGCATGCC AGGACTTTGG GATTCTTCCA TCCGGTGAGC 
GGTGAGTGGC TCGAATTCGA AAGCCCGGTG CCGTTTTGA 

 

Protein sequence

MIEVVHTDAA LLVLSKPSGL LAVPGRGQDK QDCLSARVRA RYPDALVVHR LDMATSGLMV 
MARGIAVQRI LSQSFARREV LKRYEALVHG VLETPPETEN GWSSIDLPLL SDWPNRPLQK 
VDPLHGKPSL TRWRILGHED GATRVELEPV TGRSHQLRVH LAALGYPVLG DPLYGHEVAK 
SRAGRLLLHA RTLGFFHPVS GEWLEFESPV PF