Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1579 |
Symbol | |
ID | 3105067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1678089 |
End bp | 1682327 |
Gene Length | 4239 bp |
Protein Length | 1412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637170747 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | YP_114029 |
Protein GI | 53804089 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.690161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAG AGGGCTTCCA TCCCATCGTC GGTTCCTGGT TCGAGGCGGC CATCGGCACA CCGACGCCTG CTCAGACCCG GGCCTGGGCC GCGGTGCAGG GCGGCCATAA CGTGCTGGTG GCCGCGCCCA CCGGTTCGGG CAAGACCCTG GCGGCATTCC TGGCGGTGAT CGACGAGCTG GTGCGGGAAG GGGAGGTGTT CGGCCTGCCG GACGAAACCC GTATCCTTTA CATTTCGCCG CTCAAGGCCT TGAGCAATGA CATCCACAAG AACCTGCAGT TGCCGCTGGA AGGTATACAG CGGATGCTGT TCGAATCCGG CCGGACCGCG CTGACGATCC GCTCCCGGGT CCGCACCGGC GATACGCCTG CCACCGAGCG TACCGCCATG ACCCGTCAGC CGCCGCACAT TCTGGTCACT ACGCCGGAAT CCATCTACAT CCTGCTGACC AGCGCCGGCG GGCGGCGGAT GCTGGGGACG GTGCGGACGG TGATCGTCGA CGAGATCCAC GCCGTCCTGG GCAGCAAGCG CGGGTCGCAT CTGGCGCTGT CGTTGGAGCG ACTCGAAAGA CTCACCGGGC GAAGTGTGCG ACGCATCGGG CTGTCGGCCA CTCAGCGTCC CGTCGAGGAA GTCGCGCGTT TTCTCACCGG CGGGCGCGGC GACTGTGTGG TCGTGGACGA GGGCCACCGG CGGCGGCTGG ATCTGGACAT CGAGCTGCCG GATTTCCCGC TGGAGGCCGT GCTGTCGAAC GAGGCAGCCG GGCAAGTCTA CGACCGCATG GCGCAACTGG TTCGCCAGCA CCGTACCACC CTGGTGTTCG TGAACACCCG CCGCCTGGCG GAGCGGCTGG CGCGCGCTCT GGCCGAACGG ATCGGCGAGG AAGGCGTCAC CTCGCATCAC GGCAGCCTGT CCAAGGAGCA GCGGTTGGAG GCGGAAACCC GGCTCAAGGC CGGCCGGCTG AAGGCTCTGG TGGCGACGGC TTCGCTGGAG TTGGGTATCG ACATCGGTGA CATCGACTTG GTCTGCCAGT TCGGGGCGAC CGGGACCATC GCCGCCTTCC TGCAGCGGGT GGGCCGTTCC GGCCATTACG CTGGCGGACT GCCCAAAGGC CGGTTGTTCC CGACCAGCCG TGACGATCTG ATCGACTGCC TCGCGCTGGC GGATGCACTG CGCCGGGGTG AACTCGACCG CATTCCCATC CCGGTTCGGC CGCTGGATGT GCTGGCGCAA CAGATCGTCG CCATGGTGGC CTGCGAGGAA TGGGGCGAGG ACGAGCTCTA CGATGCCGTG CGCGGCGCCT ATCCGTACCG GGATCTCGGG CGCGCCGATT TCGACGCCGT AGTCGCCATG CTGGCGGAGG GCTACAGTAC CCGCCGCGGC ATCCGCGGGG CCTATGTGCA CCGCGACCGC ATCCACGGCC GGCTGCGGCC GCGCAAAGGC GCACGGGTGA CCGCGGTCAC CTGCGGCGGC GCCATTCCCG ACAATGCCGA ATACCGGGTG GTCGTCGAGC CCGGCGGGGA GGTGGTTGGC AGCGTGGACG AGGATTTCGC CATCGAGAGC ATGGCGGGCG ATGTGTTCCA GCTCGGCAAT ACGAGCTGGC GTGTTCTGCG GCTGGAAGGG GGCGCGCTGC GGGTGGAGGA TGCTGCCGGC ATCCCGCCCA GCATTCCCTT CTGGTTCGGC GAGGCGCCGG GCCGCTCGTA CGAGCTTTCG CTGGCGGTGT CGCGCCTGCG CGCGCGGATC GGAGACGCTC TGGAGCGGAT GGCGCCGGAG AAAGTCACCG CAGAGCTGGC CGCCGAACTG GCGCTGGCGC CGCGGGCGGT GGAACAGGCG GTCAACTACC TGGCCGCCGC GAAGGCGGTG CTGGGCGTGC TGCCGACCTT CGACACGGTG GTGTTCGAGC GCTTCTTCGA CGAATCCGGC GGCATGCAGT TCATCATCCA CGCGCCCTTC GGCAGCCGGG TCAACCGCGC CTGGGGTCTG GCGCTGCGCA AACGTTTCTG CCGCACCTTC AATTTCGAGC TGCAGGCGGC GGCGACCGAA AACGCGCTGA TCCTGTCGCT CGGCGTGGCA CAGAGCTTCG CGTTGGAAGA AGTCAAACGG TTTCTGGGCC CGGACACGGT GCGGCCCCTC CTGGTCCAGG CCCTGCTCGA TGCGCCGATG TTCAAAGTGC GCTGGCGCTG GAATGCGGTA TGTGCCCTGG CGCTCAAGCG GTTCCAAGGG GGCGGCAAGA CCCCGCCCTA TTTGCTGCGG ATGCAGGCAG AAGACCTGGT CACCTGCGTG TTCCCGGACC AGCTCGCCTG TTTCGAAAAC ATCGTCGGCG ACCGCGAAGT TCCCGATCAT CCCCTGGTCA AGCAGACCGT GCACGATTGC CTGACCGAGG CCATGGACCT GGAGCGGCTG ATCGAGGTGA TCCGCGGCAT CCGCGAGGGG ACGATCCGGG TCGAATGTCG CGACCTGAAC GAGCCTTCGC CGCTGGCCGC CGAGATCGTC AATTCCAAGG TCTACACCTT TCTCGACGGT GCGCCGCTGG AAGAGCGGCG TACCCGTGCG GTGGCCATGC GCCGCTGGCT GGAGCCCCGT GCCGCCGACG ACCTGGGCCG GCTCGACGCG GCGGCGATCG CCCGCGTCCT CGACGAGATC GGGCCGCAGG GCGGGGCGGT GGAAGAGGTA CACGACGCGC TGAGCGTCTC GGGTTACGTC ACGGTGCAGG AGGTCGCCCA AAACGGCTGG ATGCGCTTCC TGGCGGAACT CGCGGCTACC GGCCGCGCCG CCCGTCTGTC CCGGGGCGGC GCGGGATTGT GGCTCGCCGC CGAACGCTGG CCGCAGTTCC GGGCCGTCTA TCCCGACACC GCGACCGAAC CGGCGCTGAG TTTGCCGCCG GCCCTGGATG CCGAGCTCTG GGAATCCGGG CCGGCCCTGG TCGAGGTTCT CCGCACCCGT CTCGGCGTAA CGGGGCCGGT GACCGTGGCG CGGCTCGTCG CCGAGACCGG GCTGGCAGCC GGGACGCTCG GAGCGGCCTT GTGTGCCCTG GAAAGCGAAG GCACGGTGTT GCGGGGCGCC TTCACTCCGG GATCGGGCGA GACCGAATGG TGCGAGCGCA GCATCCTGGC GCGTATCCAC CGCTACACCC TGGGCCGCCT GCGGCAGGCG GTCGAGCCGG TCACGGCCGC CGATTTCATG CGTTTCCTCC TGCACTGGCA GCATGTGCAT CCGGCGGCGA AGGTCCGGGG CAAGGACGGC CTCGCCCTGG TGCTGGAGCA GCTCGAAGGC TTTCAGGCCA CCGCCGCCGC CTGGGAGGGG GAGATACTGC CGGCGCGGGT CGTGGATTAC GACCCGGTTT GGCTGGATAC GCTCTGCGTT TCCGGCCGGA TCACCTGGCG GCGGCTGGTG TGCGAAGGTT CCGGTGGCGG ATCGCTGCGG GTCGCGCCTC TGGTCCTGTT GCCGCGCAGC CATCAGTGCC GCTGGTCGGC TGCGGTGGCC GGCGGGATTT CGGGTACTGC GGCCCGCTTG GCCGAGAGCC TGGAAAGGCA TGGCGCGCAG TTCTTCGATG AACTGGTGGC ATCGAGCGGG CTGCTCAAGA CACAGGCGGA AGAAGCCCTG AGCGAACTCG CGGCGAAAGG GCGGGTGACC TCGGACGGTT TCTTGGGGCT ACGGGCGCTG TTGATGCCGG AGCAGCGCAA ACGACGCTAC CGCGGTGTGA CCGGAATCGA GGAGGCCGGA CGCTGGAGTC TGGTGCCGGT CGCCGGGATG CACCCGGACC GGATCGAACA CGCTGCGCGG GTCTTGCTCA AGCGTTACGG GGTGGTGTTC CGCAGCCTGC TAGAGCGGGA GCCGGCCGTG CCGTCCTGGC TGGATCTGGT GCGGGTGTTC CGGCGGCTGG AGGCGCGGGG GGAGATCCTC GGCGGGCGGT TCGTCGCCGG ACGCTACGGT GAGCAGTTCG CCCTGCGGGA GGCCGTCGAG TCTCTGCGCA AGATCCGGAA AGAGGCACCC GAAGGCATCA TCGCCTCCGT CGACGGGGCC GATCCGCTCA ACCTCGCCGG CACCGTGCTG CCCGGTGAGC GCATCGCCGC CAACAGCGGC AAGCGGCTGG TGCTGCGGGA CGGCGTGCCG GTGGCGGTGG CAACGGCACG GGGCGTGGTG TACCTCGCCG ACGGAAGCGG TCCCATCGAC CCGCGTCAGG CATTGGCGCG CCCGGCCGTG GCGCCGGGCT TGCGGGCTTA CCTGGGCAGG CGGCGATAA
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Protein sequence | MSIEGFHPIV GSWFEAAIGT PTPAQTRAWA AVQGGHNVLV AAPTGSGKTL AAFLAVIDEL VREGEVFGLP DETRILYISP LKALSNDIHK NLQLPLEGIQ RMLFESGRTA LTIRSRVRTG DTPATERTAM TRQPPHILVT TPESIYILLT SAGGRRMLGT VRTVIVDEIH AVLGSKRGSH LALSLERLER LTGRSVRRIG LSATQRPVEE VARFLTGGRG DCVVVDEGHR RRLDLDIELP DFPLEAVLSN EAAGQVYDRM AQLVRQHRTT LVFVNTRRLA ERLARALAER IGEEGVTSHH GSLSKEQRLE AETRLKAGRL KALVATASLE LGIDIGDIDL VCQFGATGTI AAFLQRVGRS GHYAGGLPKG RLFPTSRDDL IDCLALADAL RRGELDRIPI PVRPLDVLAQ QIVAMVACEE WGEDELYDAV RGAYPYRDLG RADFDAVVAM LAEGYSTRRG IRGAYVHRDR IHGRLRPRKG ARVTAVTCGG AIPDNAEYRV VVEPGGEVVG SVDEDFAIES MAGDVFQLGN TSWRVLRLEG GALRVEDAAG IPPSIPFWFG EAPGRSYELS LAVSRLRARI GDALERMAPE KVTAELAAEL ALAPRAVEQA VNYLAAAKAV LGVLPTFDTV VFERFFDESG GMQFIIHAPF GSRVNRAWGL ALRKRFCRTF NFELQAAATE NALILSLGVA QSFALEEVKR FLGPDTVRPL LVQALLDAPM FKVRWRWNAV CALALKRFQG GGKTPPYLLR MQAEDLVTCV FPDQLACFEN IVGDREVPDH PLVKQTVHDC LTEAMDLERL IEVIRGIREG TIRVECRDLN EPSPLAAEIV NSKVYTFLDG APLEERRTRA VAMRRWLEPR AADDLGRLDA AAIARVLDEI GPQGGAVEEV HDALSVSGYV TVQEVAQNGW MRFLAELAAT GRAARLSRGG AGLWLAAERW PQFRAVYPDT ATEPALSLPP ALDAELWESG PALVEVLRTR LGVTGPVTVA RLVAETGLAA GTLGAALCAL ESEGTVLRGA FTPGSGETEW CERSILARIH RYTLGRLRQA VEPVTAADFM RFLLHWQHVH PAAKVRGKDG LALVLEQLEG FQATAAAWEG EILPARVVDY DPVWLDTLCV SGRITWRRLV CEGSGGGSLR VAPLVLLPRS HQCRWSAAVA GGISGTAARL AESLERHGAQ FFDELVASSG LLKTQAEEAL SELAAKGRVT SDGFLGLRAL LMPEQRKRRY RGVTGIEEAG RWSLVPVAGM HPDRIEHAAR VLLKRYGVVF RSLLEREPAV PSWLDLVRVF RRLEARGEIL GGRFVAGRYG EQFALREAVE SLRKIRKEAP EGIIASVDGA DPLNLAGTVL PGERIAANSG KRLVLRDGVP VAVATARGVV YLADGSGPID PRQALARPAV APGLRAYLGR RR
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