Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1562 |
Symbol | |
ID | 3102892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1661632 |
End bp | 1662366 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637170733 |
Product | ABC transporter, permease protein |
Protein accession | YP_114015 |
Protein GI | 53804119 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0917389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGA TCCTGACCCT CTTCCAGCGC GAATTGCGCA GCTATTTCGC CACGCCCGTG GCCTACGTCT TCATCGTCAT CTTTCTGCTG CTGTCCGGCG CCTTCACATT TTACCTGGGC CGGTTCTATG AACGCGGCCA GGCCGATCTC GAGCCGTTCT TCCAGTTCCA TCCCTGGCTT TATCTGTTCT TGGTGCCGGC GGTAGCAATG CGGCTTTGGG CCGATGAACG CAAAAGCGGC ACCATCGAGC TGCTGCTGAC GCTGCCCGTC ACCATGGGGC AGGCCGTGCT GGCCAAATTC CTGGCGGCTT GGTCCTTCGT CGCCTTGGCC TTGGCGCTGA CCTTCCCCAT CTGGATCACG GTCAATTATC TGGGCGATCC GGACAACGGA GTCATCGTTA CGGGCTATCT CGGCAGTCTG CTCATGGCAG GGGCATATCT CGCCATCGGC GCCTGCCTGT CGGCGGCCAC GCGCAGCCAG GTCGTCGCTT TCATCCTCAG TGTGGTGGTG TGTTTCCTGT TCCTTCTGGC CGGTTTTCCG CTGGTGTTGG ACCTGTTCCG CGCCATCGCC CCCCAAAGCC TGGTGGATGC GATCGCCGGC CTGAGCTTCC TCAGCCATTT CAACGGTATT TCCCGTGGCG TGATCGATCT GCGCGACCTG ATCTATTTCC TCCTCACCAT CGGCTTCTGG CTGTATGCCA ATGCCGTCGT CATCGACCTG AAGAAGGCCG ATTAA
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Protein sequence | MKPILTLFQR ELRSYFATPV AYVFIVIFLL LSGAFTFYLG RFYERGQADL EPFFQFHPWL YLFLVPAVAM RLWADERKSG TIELLLTLPV TMGQAVLAKF LAAWSFVALA LALTFPIWIT VNYLGDPDNG VIVTGYLGSL LMAGAYLAIG ACLSAATRSQ VVAFILSVVV CFLFLLAGFP LVLDLFRAIA PQSLVDAIAG LSFLSHFNGI SRGVIDLRDL IYFLLTIGFW LYANAVVIDL KKAD
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