Gene MCA1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1562 
Symbol 
ID3102892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1661632 
End bp1662366 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID637170733 
ProductABC transporter, permease protein 
Protein accessionYP_114015 
Protein GI53804119 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0917389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGA TCCTGACCCT CTTCCAGCGC GAATTGCGCA GCTATTTCGC CACGCCCGTG 
GCCTACGTCT TCATCGTCAT CTTTCTGCTG CTGTCCGGCG CCTTCACATT TTACCTGGGC
CGGTTCTATG AACGCGGCCA GGCCGATCTC GAGCCGTTCT TCCAGTTCCA TCCCTGGCTT
TATCTGTTCT TGGTGCCGGC GGTAGCAATG CGGCTTTGGG CCGATGAACG CAAAAGCGGC
ACCATCGAGC TGCTGCTGAC GCTGCCCGTC ACCATGGGGC AGGCCGTGCT GGCCAAATTC
CTGGCGGCTT GGTCCTTCGT CGCCTTGGCC TTGGCGCTGA CCTTCCCCAT CTGGATCACG
GTCAATTATC TGGGCGATCC GGACAACGGA GTCATCGTTA CGGGCTATCT CGGCAGTCTG
CTCATGGCAG GGGCATATCT CGCCATCGGC GCCTGCCTGT CGGCGGCCAC GCGCAGCCAG
GTCGTCGCTT TCATCCTCAG TGTGGTGGTG TGTTTCCTGT TCCTTCTGGC CGGTTTTCCG
CTGGTGTTGG ACCTGTTCCG CGCCATCGCC CCCCAAAGCC TGGTGGATGC GATCGCCGGC
CTGAGCTTCC TCAGCCATTT CAACGGTATT TCCCGTGGCG TGATCGATCT GCGCGACCTG
ATCTATTTCC TCCTCACCAT CGGCTTCTGG CTGTATGCCA ATGCCGTCGT CATCGACCTG
AAGAAGGCCG ATTAA
 
Protein sequence
MKPILTLFQR ELRSYFATPV AYVFIVIFLL LSGAFTFYLG RFYERGQADL EPFFQFHPWL 
YLFLVPAVAM RLWADERKSG TIELLLTLPV TMGQAVLAKF LAAWSFVALA LALTFPIWIT
VNYLGDPDNG VIVTGYLGSL LMAGAYLAIG ACLSAATRSQ VVAFILSVVV CFLFLLAGFP
LVLDLFRAIA PQSLVDAIAG LSFLSHFNGI SRGVIDLRDL IYFLLTIGFW LYANAVVIDL
KKAD