| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1550 |
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| Symbol | sdhA |
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| ID | 3104441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1651661 |
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| End bp | 1653448 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637170723 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_114005 |
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| Protein GI | 53804137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG CCTACGAAAT CATCCGGCAC ACCTACGATG CCGTCGTGGT CGGCGCCGGC
GGTGCGGCCC TGCGCGCCAC GCTGGGGATG GCTGAGAAGG GCCTCAAGAC CGCTTGCATC
ACCAAGGTGT TTCCCACCCG CAGCCATACC GTGGCGGCGC AGGGAGGCAT CAGCGCCGCG
CTCGGCAACA TGGGCGAGGA TGACTGGCGC TGGCACATGT ATGACACGGT CAAAGGCTCG
GACTGGCTGG GCGACCAGGA CGCGATCGAA TATATGTGCC GCGAGGCCAT GCAGGCAGTC
ATCGAACTGG AGCACTATGG TGTTCCATTT TCGCGCACAG AAAGCGGCAA GATTTACCAG
CGCCCCTTCG GCGGCATGAC CACGCGCTAT GGCAAAGGCG TAGCCCAGCG CACCTGCGCC
GCCGCAGACC ATACCGGCCA TGCAATCCTG CAGACCCTCT ACCAACAGTC GCTGAAACAT
GAAGCCGAGT TCTTCATCGA ATATTTCGCC CTCGACCTCG TCATGGACGA AGGTGAATGC
CGCGGTGTGC TGGCCTGGCG TCTTGATGAC GGGACGCTGC ACCTGTTCCG GGCACACATG
ACCGTGCTCG CGACCGGCGG CTACGGACGG ACCTATTTTT CTTCCACCTC GGCCCATACT
TGCACCGGCG ACGGCAATGC GATGGTGCTG CGGGCCGGCC TGCCCTTGCA GGACATGGAG
TTCGTCCAGT TCCATCCCAC CGGCATCTAC GGTGCTGGCT GTCTCATCAC CGAAGGCGTG
CGGGGTGAAG GCGGCTATCT CACCAATTCC GAAGGTGAGC GCTTCATGGA GCGCTACGCC
CCGCACGCCA AGGATTTGGC CTCGCGCGAC GTGGTCAGCC GCGCCATGAC GATCGAGATT
CGGGAAGGCC GCGGTCTCGG GCCGGAAAAA GATCACCTGC ATCTGCATCT GGAACATCTC
GACCCGGCGG TCATCCAGGA GCGGCTTCCC GGCGTCGCCG AGACCGCCCG GATCTTCGGC
GGCATCGACG TGACCCGGGA ACCGATCCCG GTGTTGCCGA CCGTGCATTA CAACATGGGC
GGTGTTCCCA CCAATTACCG TGCAGAGGTG TTGACTCTCA AGGACGGAGA TCCGGAAACC
GTGGTGCCGG GCCTGATGGC GATCGGTGAA GGCGCCTGTG TCTCCGTGCA TGGCGCCAAC
CGGCTGGGTT CAAACTCATT GCTGGATCTG GTCGTGTTCG GGCGTGCTGC CGCGTTGCGC
TGCGCCGAAC TGATCCGGCC GCGCCAGATG CACAAACCTC TGCCCGAGGG CGCCTGTGAT
ACCACCCTGG CCCGCTTCGA CCGCCTGCGT CATGCCTCTG GCAGCCGTCG GACCGCCGAC
ATCCGGCTGG ACATGCAGCG CACGATGCAG AGCCACGCCA GCGTATTCCG GACCGGCGAG
GTGTTACGGG AAGGGGTGAA AGCGCTGAAG CGGATCATGG ACTCCTTCAG CGACGTGTGC
ATCCGGGACC GCTCCCTGGT CTGGAACACC GATCTGCTCG AAACCCTGGA GCTGGAAAAT
CTGCTTCAGC AGGCCATGGT GACCGTCGCC GCCGCACTTA ACCGGGAGGA AAGCCGCGGC
AGCCATGCCC GCGAGGACTT CCCGGAGCGG GATGACGTTC ACTGGCTCAA GCACTCGCTG
ATTTGGCTCG ACCAGCGGCA CGAAACGACC ATAGCGTACC GGCCCGTCCA CCTCCATACT
CTGACCTCCG ACGTGGAGCC GATACCGCCC CAGAAGCGTG TCTATTGA
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| Protein sequence | MSKAYEIIRH TYDAVVVGAG GAALRATLGM AEKGLKTACI TKVFPTRSHT VAAQGGISAA
LGNMGEDDWR WHMYDTVKGS DWLGDQDAIE YMCREAMQAV IELEHYGVPF SRTESGKIYQ
RPFGGMTTRY GKGVAQRTCA AADHTGHAIL QTLYQQSLKH EAEFFIEYFA LDLVMDEGEC
RGVLAWRLDD GTLHLFRAHM TVLATGGYGR TYFSSTSAHT CTGDGNAMVL RAGLPLQDME
FVQFHPTGIY GAGCLITEGV RGEGGYLTNS EGERFMERYA PHAKDLASRD VVSRAMTIEI
REGRGLGPEK DHLHLHLEHL DPAVIQERLP GVAETARIFG GIDVTREPIP VLPTVHYNMG
GVPTNYRAEV LTLKDGDPET VVPGLMAIGE GACVSVHGAN RLGSNSLLDL VVFGRAAALR
CAELIRPRQM HKPLPEGACD TTLARFDRLR HASGSRRTAD IRLDMQRTMQ SHASVFRTGE
VLREGVKALK RIMDSFSDVC IRDRSLVWNT DLLETLELEN LLQQAMVTVA AALNREESRG
SHAREDFPER DDVHWLKHSL IWLDQRHETT IAYRPVHLHT LTSDVEPIPP QKRVY
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