| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1532 |
|---|
| Symbol | trmB |
|---|
| ID | 3102837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1632163 |
|---|
| End bp | 1632858 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637170705 |
|---|
| Product | tRNA (guanine-N(7)-)-methyltransferase |
|---|
| Protein accession | YP_113987 |
|---|
| Protein GI | 53804177 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
|---|
| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.578287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CGCTGATGAA CGCCGACCCG CCCCGCCGCA TCCGCAGCTT CGTGCTCCGG
CAAGGACGCA TCACCGCCTC GCAGAAGAAT GCCCTGGAAA ACCTGTGGCC GCGCTATGGC
CTGGATCCGG CAGCGGCGTT CGACCCTGCG GCCGTATTCG GCCGACGGGC GCCGCTCACC
CTGGAAATCG GCTTCGGCAA CGGCGAAAGC CTGGCGGCGA TGGCCCAGAG CCTGCCGGCA
GAGGACTTCA TCGGCGCGGA AGTCCATCCT CCCGGCATCG GCCATCTGCT GATCGAGCTG
GAGCGGCGGG GACTGGACAA CGTTCGGGTG TTCCGGGTCG ATGCCGTCGA ACTGTTGGAG
AATTGCATCC CCGAAGGCGC CCTGGCGCGG ATCCTGGTGT TCTTTCCCGA TCCCTGGCAC
AAGCAGCGGC ACAAGAAACG CCGCCTCGTC TCGCCGGCAT TCGCCCGGCT GGCCGCCTCC
CGCCTGGCGC CGGGAGGCGT GTTCCATGCC GCCACCGACT GGGAGGATTA TGCGATGCAG
ATGCTGGAGG TATTGAACGG CTGCGAGACG CTGGTAAACC AGGCGCCGGA CGGGCGCTTC
AGCGAACGCC CCGCTTACCG CACGCCGACC AAGTTCGAAC AGCGCGGTCA GCGCCTGGGA
CACGGCGTGT GGGATCTGGT CTACCGGCGA TCCTGA
|
|---|
| Protein sequence | MTDTLMNADP PRRIRSFVLR QGRITASQKN ALENLWPRYG LDPAAAFDPA AVFGRRAPLT
LEIGFGNGES LAAMAQSLPA EDFIGAEVHP PGIGHLLIEL ERRGLDNVRV FRVDAVELLE
NCIPEGALAR ILVFFPDPWH KQRHKKRRLV SPAFARLAAS RLAPGGVFHA ATDWEDYAMQ
MLEVLNGCET LVNQAPDGRF SERPAYRTPT KFEQRGQRLG HGVWDLVYRR S
|
|---|
| |