Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1521 |
Symbol | |
ID | 3103891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1623477 |
End bp | 1624823 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170695 |
Product | major facilitator family transporter |
Protein accession | YP_113977 |
Protein GI | 53804195 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.537503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCT TGTCTCCGGC CACACAATTC CGGAGGATAG CCCGCTCCAA ACCCCTCCCC GACAAGGATT CCACCATCCC CATGACATCT GCACCCCCGT TGCGTCGCCG TCACGACCGC ATCATCCTCG CCGGACTGAT CGGCAACGTG ATGGAGTGGT ACGACTTTGC CGTTTACGGC TATTTCGCCG TTGTGATCGG CAAGCTGTTT TTTCCGGCGG ATGATCCCGC GGCTTCGCTG ATCGCCTCGT TCGGAGCGTT CGCCGCTGGC TTCATCGTCA GGCCGGTCGG CGGATTGCTA TTCGGCCGGA TCGGAGACCG CCTGGGGCGG CAGCAGGCAC TCACCTGGTC GGTCATGGCA ATGGCCGTGC CCACGGTGCT CATGGCGTTC CTGCCGACCC ATGCTTCCGC CGGTATCGCC GCCCCGGTTG CCATCGTCCT GCTCCGCATC GTTCAGGGCT TGTCCGTCGG CGGGGAATTT ACCAACTCCC TCGTGTTTCT GGTGGAGAAT GCGCCGGGCG AACGTCGGGC CTTCACCGCA GTGTGGGGAA GTTGGGGCGC ATCTGCGGGC ATACTGCTGG GATCGGGTGC AGGTGATCTG CTGACCCATG TCCTGAGTGA AGAACAAGTC CTGAACTGGG GCTGGCGTTT GCCGTTCCTG GCCGGGGGGC TGGTGGCGCT AACGGGTTAT TGGCTCCGCC AGGGGCTGGA GCCGGAACTT CCGAATGCGG AACACGCCAG CCCGGTCCGG GCCGTGTTCG CCAGGCACAA AGGGGCGATG CTGCGGGTTG CGCTGCTGAA CCTCGGTTTC GGCGTGGGCT TCTACGCTGC CTTCATCTAT GCCGTGAGCT ACATCAAGAA CATCGACCAT CTGCCGGACG CGACGGTTTT CAATCTGAAC ACCTGGGCGA TGGCTCTGCT TCTGGTCCTG CTGCCCGTCG CAGCCTGGGC GTCCGACCGG TTTGGCCGCA AGCCGGTGCT GGCCGCCGGC TTCGGCCTGC TCGCACTGGG CGCGATTCCC CTGTTTCATC TGATCCACAC CGCCGACCCT CCCACCATCT TTCTGGGTGA AGCCGGCTTT GCACTGACCA TCGGTTTGAT CAGCGGCGGC ATCGTCGCCA CCAACGTCGA GCTGGTGCCG GCGGAGGTAC GCTGCACCGG TCTGGCCTTT GCCTACAATG CGGCGGTGGG GTGCTTCGGC GGCAGCACAC CGCTGATCGC GGCGTGGCTG ATCGACCGGA CCGGCAACCC GCTCACGCCT GCCTACTGGA TCGCGGCAAC GGCCACGGTG TCACTGATCA CGCTCGTCGC ATTCGTGCGC GAGTTCCACT TTCACATGCC CCGCTAA
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Protein sequence | MASLSPATQF RRIARSKPLP DKDSTIPMTS APPLRRRHDR IILAGLIGNV MEWYDFAVYG YFAVVIGKLF FPADDPAASL IASFGAFAAG FIVRPVGGLL FGRIGDRLGR QQALTWSVMA MAVPTVLMAF LPTHASAGIA APVAIVLLRI VQGLSVGGEF TNSLVFLVEN APGERRAFTA VWGSWGASAG ILLGSGAGDL LTHVLSEEQV LNWGWRLPFL AGGLVALTGY WLRQGLEPEL PNAEHASPVR AVFARHKGAM LRVALLNLGF GVGFYAAFIY AVSYIKNIDH LPDATVFNLN TWAMALLLVL LPVAAWASDR FGRKPVLAAG FGLLALGAIP LFHLIHTADP PTIFLGEAGF ALTIGLISGG IVATNVELVP AEVRCTGLAF AYNAAVGCFG GSTPLIAAWL IDRTGNPLTP AYWIAATATV SLITLVAFVR EFHFHMPR
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