| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1518 |
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| Symbol | |
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| ID | 3104252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1620150 |
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| End bp | 1620926 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170692 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_113974 |
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| Protein GI | 53804369 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCTC AGGTCCTCAA ACGGGCCGCC AGGGTATGGG CGGACCGCGG CAAGCCCAGA
CGTGAAACCT CTCCCGCCGT TCCGGAAGAA GTCGGCGCGG GAGTGGCATC GGGCGATGAA
AAAGATGCCG AAGCCGTTTT CGTTTCCCTC CTTCGGCAAA ACCCGGAATC GCCGGAGGCT
CTGCATGGCC TCGGGCGCTT GCAGGGCATG CGGGGCGAGC TGGCGCCCGC CGGCCGGAAT
CTGGCCGAGG CGGTGCGGCT CAAACCCGAT TTTGCGGAAG CCTGGATCGA TCTCGGCAAT
GTCCATCTGA TGTCGGAAAA GCCGGAGGAG GCGGAGTCGG CCTATCGACG AGCGCTCGCC
GTGGACGAGA CCAGCGCCTT GGCCTGGTGT AACTTGGGCA TCTGCCAGCA AAGGCGGTCC
CAACTGAAGC AGGCATCCGA GAGCTTCCGG AGGGCGTTGG ACCTGAACCC CCGTTTTGGC
CTGGCGCTGC GGCATTGGGT AGGTATCCAG ACGAAGCTCG ATTGGCCGGA TGGCGCCGCG
GAGCTTCTGG AGCATTGGGC CGATACCGCG CCAGACGACG CCGAAGCGCA GGCCGCAGTG
GGATTCATGT ACCTTAACAG GCCGTTGAAA AAGTGTCCAT CGAAGCGGCC ATGTACCCGT
TTGCGTGGGT CCGAGGCCGG CGCAAGCCGT TTTTCTCGGC TCCGACAGCC GCTTGGGCTC
CCCCTTTGGG GGCTGCTCGC CCATTTTGGG CGCACTGACC CCCGCAATCA CGCATGA
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| Protein sequence | MLAQVLKRAA RVWADRGKPR RETSPAVPEE VGAGVASGDE KDAEAVFVSL LRQNPESPEA
LHGLGRLQGM RGELAPAGRN LAEAVRLKPD FAEAWIDLGN VHLMSEKPEE AESAYRRALA
VDETSALAWC NLGICQQRRS QLKQASESFR RALDLNPRFG LALRHWVGIQ TKLDWPDGAA
ELLEHWADTA PDDAEAQAAV GFMYLNRPLK KCPSKRPCTR LRGSEAGASR FSRLRQPLGL
PLWGLLAHFG RTDPRNHA
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