Gene MCA1510 details

Gene Information

• Locus tag: MCA1510
• ID: 3103894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1609935
• End bp: 1610351
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637170684
• Product: fimbrial protein
• Protein accession: YP_113966
• Protein GI: 53804389
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000690325
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCGC TACAGAAAGG TTTTACACTG ATCGAGCTGA TGATCGTCGT GGCGATCATC 
GGTGTCCTGG CAGCGGTCGC TCTGCCTGCC TATCAGGACT ATACGGTCCG GGCGAAAGTG 
TCGGAATTGA TTCTTGCCGG CAGCAAATTC AGGACGGATA TCACCGAAAA GTGCCAGCTG 
GCTGGTACAT GTACCGGCTC AGGAACGAGC ATGACGGTTG CGATTGGGGG CAAGATAGCA 
ACAGGCAGCG ACGTTGGCGA CAACGGAACG ATCGTGATAC AGGGAAGTAC TGCCACTGAC 
AGCGTGGGCG CAGCCGTGAG TATCACCTTG ACCCCCAGTT GGAATAGTAC GCTGGGATCG 
GCGGTCTGGT CGTGCACCGG CGCTCCGGCT AGATATGTTC CTGGTTCATG TCGCTGA 

 

Protein sequence

MKALQKGFTL IELMIVVAII GVLAAVALPA YQDYTVRAKV SELILAGSKF RTDITEKCQL 
AGTCTGSGTS MTVAIGGKIA TGSDVGDNGT IVIQGSTATD SVGAAVSITL TPSWNSTLGS 
AVWSCTGAPA RYVPGSCR