| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1479 |
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| Symbol | rluC |
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| ID | 3105000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1572164 |
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| End bp | 1573114 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637170654 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_113936 |
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| Protein GI | 53804453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0352781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGAAAC CTCTCCCGCA AGACCCGAAC CGGCCTCGCC TGATAGAAGT CGATGCCGAG
ACAGCCGGCC AGCGCATCGA CAATTTTCTG TTTTCGCGCC TGAAGGGCGT CCCCAAGAGC
CATGTGTACC GTATCCTCCG CACCGGCCAG GTGCGGATCA ACGGCGGCCG CAGCAAGGCG
CAGCAGCGGC TGAACGAAGG TGACGTCGTT CGGATCCCGC CCTTGCGCCT CGCCGAGGCG
CCGGAGGCGG GGATCCCGAC GCCATGGCTG GAAAACCGGA TCCTCCACGA AGACGAGGAC
CTTCTGGTCG TCAACAAACC TGCGGGCATG GCAGTGCATG GCGGCAGCGG CCTCCGTTTC
GGGGTGATCG AAGGTCTGCG GGCGGCGCGG GAGGATGCGC GGTTCCTCGA ACTGGTGCAC
CGGCTGGACC GCGACACGTC GGGCTGTCTG CTGATTGCCA AGCGCCGTTC CGCGCTGCGC
CAGTTGCACG AGCAGTTCCG GGGAGAGGGG GTGGACAAGA CCTATCTGGC TCTGTTCAGC
GGCGTGTGGG CGCGCCGGCG GCAAGTGGTG GACGCCCCCT TGCTCAAGAA CGTCTTGCAG
AGCGGCGAGC GGATGGTGAA GATTTCGTCC GAGGGGAAGG CGGCGATCAC CGAATTCCGC
CGCTTGGAAC CACTTTCCGG GGCGACGCTG GTGGAAGCCA GACCGGTGAC CGGCCGTACC
CATCAGATCC GGGTGCACGC CCGGTCGCTG GGTCATCCGC TGGCCGGTGA CGAACGTTAC
GGGGATCCCT CGCTCAACCA GGACTTCCGC CAGCGCGGTT TGAAGCGCAT GTTTCTGCAT
GCCGCGACGC TCGCGTTCAC CCATCCCCGA AACGGGCGCG AAATCCGCGT CGAAGCGCCC
CTGGAACCGG ACCTTCAAGA CTTCCTGTCG GCTGTCAGGC CTCGAGGCTG A
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| Protein sequence | MMKPLPQDPN RPRLIEVDAE TAGQRIDNFL FSRLKGVPKS HVYRILRTGQ VRINGGRSKA
QQRLNEGDVV RIPPLRLAEA PEAGIPTPWL ENRILHEDED LLVVNKPAGM AVHGGSGLRF
GVIEGLRAAR EDARFLELVH RLDRDTSGCL LIAKRRSALR QLHEQFRGEG VDKTYLALFS
GVWARRRQVV DAPLLKNVLQ SGERMVKISS EGKAAITEFR RLEPLSGATL VEARPVTGRT
HQIRVHARSL GHPLAGDERY GDPSLNQDFR QRGLKRMFLH AATLAFTHPR NGREIRVEAP
LEPDLQDFLS AVRPRG
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