Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1478 |
Symbol | |
ID | 3104665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1571117 |
End bp | 1572100 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170653 |
Product | signal peptide peptidase SppA, putative |
Protein accession | YP_113935 |
Protein GI | 53804454 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.484654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGG ATTCCACCCC CCAGTCGTCG ACCGAATCGG CCCGTTCCTG TTCCGTCTGG GAACGGGAAG CGCTGGAAAA GCTCCTGCTC GAAGCGCTGG TGGAACAGCG GAGGGCACGG CGGTGGAACC TGGCGTTCAG GGCCTTTCTG GTTGCCGCGA TCGGGCTCGG CCTCGTACTG GCCTTCAAGC CGCTGGCTCA TGACGGTCTG ACGGCGTCCG GCAAGTCACA CACGGCGGTG GTGGATGTGA CCGGCACCAT CGCCGAAGGC GGCGAAACCG ATGCCGACAC CATTATCGAG GGGCTGCGCG AAGCGGCCGA GGCCAAAGGG GTGAAAGGCA TCGTCCTCAG GATGAACACG CCGGGTGGCA GTCCGGTGCA ATCGGCCTAT GTCTACGATG AGATCCGCAG GATCAAGAAA GAGCATCCGG CGCTGCCGGT CTATGCCGTG GTGACCGATG TTTGTGCCTC AGGGGGTTAT TACATCGCCT CGGCCACGGA TAGGATCTTC GTGAACCCGG CCAGTATCGT CGGCTCGATC GGCGTCATCA TGAACGGTTT CGGCTTCGTC GGCACGCTGG AGAAACTGGG GGTGGAGCGT CGGGTAATGA CGGCGGGCGA TCACAAGGCG ATCCTCGATC CGTTCGGTCC GGTGGATCCG GTCGAGAAAC AGCATGTACA GCGTTTGCTG AACACGGTCC ACCAGCAGTT CATCGCTGCG GTGAAAGCCG GCCGTGGCGA TCGGCTCAAG GACCGGCCCG AAATCTTCTC GGGCCTTGTG TGGACCGGGG CCGAGGGGAT CGAGCTCGGA CTGGTGGATG CCGTCGGCGA ACTGCATGAG GTGGCCGAGA CGGTCATCGG GGCCAAGGAG ATCGTGAATT ACTCGCACCG GGAAACCCTG CTGGACCGCG TCGTCCGGCA ACTGGGCACC AGCCTGGAAG CGGCTTTGAC GAAACTGTCC GCCTCGTCGC CGCGCCTGTA CTGA
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Protein sequence | MNEDSTPQSS TESARSCSVW EREALEKLLL EALVEQRRAR RWNLAFRAFL VAAIGLGLVL AFKPLAHDGL TASGKSHTAV VDVTGTIAEG GETDADTIIE GLREAAEAKG VKGIVLRMNT PGGSPVQSAY VYDEIRRIKK EHPALPVYAV VTDVCASGGY YIASATDRIF VNPASIVGSI GVIMNGFGFV GTLEKLGVER RVMTAGDHKA ILDPFGPVDP VEKQHVQRLL NTVHQQFIAA VKAGRGDRLK DRPEIFSGLV WTGAEGIELG LVDAVGELHE VAETVIGAKE IVNYSHRETL LDRVVRQLGT SLEAALTKLS ASSPRLY
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