| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1465 |
|---|
| Symbol | lepB |
|---|
| ID | 3104582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1555363 |
|---|
| End bp | 1556151 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637170640 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_113922 |
|---|
| Protein GI | 53804475 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTACG ATTTCTCGTT TTTTCTCGTC GCCGCCACGT TCGTCACCGG TGCGGTATGG
GGCGGTTACG CGCTCTGGCT CAAACGGCAC CCCCTGCCAG AAGGCACAGC GCACAAGGAG
CCGATCTTGG TGGAATATGC CCGGTCATTC TTTCCGATCG TGCTCGTCGT CATGCTGCTG
CGTTCGTTTC TGGTGGAGCC GTTCCGCATC CCCTCGGGTT CCATGATGCC AACGCTTCTG
ATCGGCGATT TCATCCTGGT CAACAAATTC ACCTATGGCA TCCGCCTGCC TGTGCTGAAT
ACCAAGATCA TCGAGATGAA CGAGCCCCAG CGGGGCGACA TCGTGGTGTT CCGGTTTCCG
AAGGATCCGA CCGTCGATTA CATCAAACGC GTGATTGGTC TGCCGGGCGA CAGGATCGGT
TATTACAACA AGCAGCTCTA TGTGAACGGC AAGCCCATGC CCCAGACATT GCTGGGCATT
TACCAAGGGG TGGGGCAGGG TGCCAGCATG AGCGGGGCCG AGCTGCTGTC AGAGGATCTG
GAAGGCGTCG AGCACGACAT TTTGATCCGC CATGGCCAGC CGACGGTGCA GGGCGAGTTC
ACCGTACCCG AAGGCAGCTA TTTCGTGATG GGCGACAACC GCGACAACAG CAACGACAGC
CGCTATTGGG GGGTGGTGCC CGAAGCCAAC CTGGTGGGCA AGGCCTTTTT CATCTGGATG
AGCTGGGACT TCGAGAACGG CGGCATCGGC TTTTCGCGCC TCGGCACGGT ACTGAATTCC
GGACGGTGA
|
|---|
| Protein sequence | MDYDFSFFLV AATFVTGAVW GGYALWLKRH PLPEGTAHKE PILVEYARSF FPIVLVVMLL
RSFLVEPFRI PSGSMMPTLL IGDFILVNKF TYGIRLPVLN TKIIEMNEPQ RGDIVVFRFP
KDPTVDYIKR VIGLPGDRIG YYNKQLYVNG KPMPQTLLGI YQGVGQGASM SGAELLSEDL
EGVEHDILIR HGQPTVQGEF TVPEGSYFVM GDNRDNSNDS RYWGVVPEAN LVGKAFFIWM
SWDFENGGIG FSRLGTVLNS GR
|
|---|
| |