Gene MCA1463 details

Gene Information

• Locus tag: MCA1463
• Symbol: rnc
• ID: 3102357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1554293
• End bp: 1554985
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637170638
• Product: ribonuclease III
• Protein accession: YP_113920
• Protein GI: 53804477
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCCGTA GCCACGAACA CCTGGCGCGC AAACTCGGCA TTCCGTTCCG CGATCCGGGC 
CTGCTCAGGA ATGCTCTCAC TCACCGCAGC GCCGAAGGCG TAAACAACGA GCGCCTGGAG 
TTCCTGGGCG ATTCAGTGCT GGGATTCGTG GTCACCGAGT ATCTCTATCA GCGTTTCCCT 
TCGGCCGACG AAGGGGTATT GAGCCGGCTC AGGGCGACAC TGGTGAATGA GACCTCCCTG 
GCCAGGATCG CGCGGGAGCT GGAGCTGGGC GAATACCTCA TCCTGGGGTC CGGCGAGCTC 
AAGAGCGGCG GCTACCGGCG TGACTCGATT CTGTCCGACG CCTTGGAGGC CATCCTCGGC 
GCCGTCCTGA GGGATCAGGG CATCGACGCC TGTCGGGCAC TGATCCTGAC GCTGTTCGAG 
CGCCCGCTGT CCGCATTGTC GCTGGACGAC TGGAAAAAGG ACCCGAAGAC GCGTTTACAG 
GAACTGATGC AAGGACGCGG CCTGCCTCTC CCCGTTTATA CCCTCATCGA CCAGTCGGGG 
CTGCCACACG ACCAGCATTT CCGTGTACGT TGCGAGGTTC CGCTGGCTGT TGAACCTTGC 
GTGGGCGAGG GCAGTTCACG TAAGAAAGCC GAACAACAGG CAGCGGAAAA CATGCTCAGC 
CGCCTTTCGG ACCAATCGAG GTTCAGAGTT TGA 

 

Protein sequence

MIRSHEHLAR KLGIPFRDPG LLRNALTHRS AEGVNNERLE FLGDSVLGFV VTEYLYQRFP 
SADEGVLSRL RATLVNETSL ARIARELELG EYLILGSGEL KSGGYRRDSI LSDALEAILG 
AVLRDQGIDA CRALILTLFE RPLSALSLDD WKKDPKTRLQ ELMQGRGLPL PVYTLIDQSG 
LPHDQHFRVR CEVPLAVEPC VGEGSSRKKA EQQAAENMLS RLSDQSRFRV