| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1446 |
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| Symbol | pqqB |
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| ID | 3104780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1538293 |
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| End bp | 1539207 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637170622 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_113904 |
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| Protein GI | 53804509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00766153 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATTC GTGTGCTCGG CGCCGGCGCC GGCGGCGGAT TCCCGCAGTG GAACTGCCGA
TGCGACAATT GCCGGCGCTT CCGGGAAAAA AACATCAACG CCCGAGGCCG CACCCAGTCC
TCGATCGCAG TCAGCGCCGA CGGCCAGCGC TGGGTGCTCT TCAACGCCTC GCCAGACATC
CGCAGCCAGC TCGAGGCCTT CCCGGCCAGC CATCCCAGCA AGGGTGTCCG CGATACCGGC
ATCCATGCCA TCGTGCTGAT CGACAGCCAG ATCGATCACA CCACCGGCCT TTTGATGCTG
CGTGAATCCA CCCGCCCCCT GCAAGTGTAT TGCAGCGAGA TGGTGAAGCA GGACCTCTCC
ACCGGTTTTC CGCTGTTCCG GATGCTGGAG CATTATTGCG GGGTGGAGCA GCACACCGTG
CCGTTGGATG GGAGCGGCTT TACGATTCCC GGCATCGAGG GCCTGAAATT CTCGACCCAC
TCGCTGAAAA GCAAGGCACC TCCCTATTCG CCCCATCGCC ATGATCCGCA CGAGGGCGAC
AATATCGGCG TGATCGTCGA AAATTTGGAA AACGGCCGCA AGCTCTACTA TGCGCCGGGC
CTGGGGGAGA TCGAGCCGCA CGTCCGCGCC GCCATGGAAG CCGCGGACTG CCTCCTGGTC
GACGGAACTT TCTGGCGCGA AGACGAAATG CGTCACGCCG GCATCTGCGA CAAGCTTGCA
CGTGAGATGG GCCACCTGCC GCAGTCCGGT CCGGGCGGCA TGCTGGAAAT CTTGAACACC
CTGCCGAATG CTCGCAAGGT CTTGATCCAC ATCAACAACA CCAACCCGAT TCTGGATGAA
GATTCGCCAC AATATCGTAC CCTGAGCGAA GCCGGGGTCG AAGTTGCCTA CGACGGTTTG
GAAATCGTTT TGTGA
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| Protein sequence | MIIRVLGAGA GGGFPQWNCR CDNCRRFREK NINARGRTQS SIAVSADGQR WVLFNASPDI
RSQLEAFPAS HPSKGVRDTG IHAIVLIDSQ IDHTTGLLML RESTRPLQVY CSEMVKQDLS
TGFPLFRMLE HYCGVEQHTV PLDGSGFTIP GIEGLKFSTH SLKSKAPPYS PHRHDPHEGD
NIGVIVENLE NGRKLYYAPG LGEIEPHVRA AMEAADCLLV DGTFWREDEM RHAGICDKLA
REMGHLPQSG PGGMLEILNT LPNARKVLIH INNTNPILDE DSPQYRTLSE AGVEVAYDGL
EIVL
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