| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1422 |
|---|
| Symbol | |
|---|
| ID | 3102747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1509919 |
|---|
| End bp | 1511772 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637170597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_113879 |
|---|
| Protein GI | 53804241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.943384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACGC GGCAACCGCC GGCATTGAGC CTTCGGTGGG TGGTGGATGG TATGGGCGGC
CGGTGGCTCG ACGGGATTTA CGCCGCGGCG CTTTGTCTCG GCCTGACGGC CTGTGATGAA
CCCGATGCTC CGACACCGGA CTCCGGCTTC GGTATCGGTG TGAACATCGC CGGTCTGGCC
TATTACGGCA CTGAAATTCC TTTCGTCGAT CTGTTCAAAC TCTCGGGACC CTGGCTCACC
CAATGCCGGA CCGGGCGCGA TCCGGGCTGC AACGGACAAG GCTGGCCTCC CGGCGCGAGC
GCCTGGAACA CGCTCGAACA GGATGCGTTG GCACTGGATG CGGCGGGGTA TCCGAAATCG
CTGTCGGATC CTGCCCGAAA CGACGCGTCC GGCAGTCGTT TCACCTCCGT CGCCACCCTG
GTACCGACCG ACCTGAATCC TTCCCGACCG GCCGGACGTT TCATCGTCCG CTACCAGGGC
CAGGGCACGC TCGGCTATGC GCGGGGCGCC GTTCGCAATG CCGTTCTATC CAGACCCGGA
CGGGACGTCG TCGACGTGAC TGGCACCGGT GGCGAATACT GGTTCGAACT CGCCATCCTG
GCCACGGATC CCGGCGGCAA CGGCGATCAC CTCCGCAACA TCAGAGTCGT GCCCGAAGGC
GGCACCTGCG AAGGACGGCC CACGGCCTTC TGCACCGACA CCCAGACCTG CGGGACGCAA
CGTGCCTGCC GGCCGTTCGA GGAAGCGGAC CCCATCTTCG ATCCCCGATT CCTGCGCAAC
CTGGCGCCGT TCCGCGCCAT CCGTTTCATG GCCTACCAGA ACACCAACGA TTCCACCGCC
GTTGGCTGGA CCGATCGCAC CGTTCCGGAC AGCCGGACCT GGGCGTCCGA GGGCGGAGAC
GGCGGTCCGG CTGAGCTGAT CCCGGCATTG GGCAACCGCC TGCAGGCGGA CGTCTGGGTA
AACATGCCTG CCCGCGCCGA CGACGGCTAC GTCCGCCAGT TCGCCATGCT GGTGCGGCGG
GAGCTCGACA AGGACCGTAA GGTCTACGTC GAATACGGCA ACGAAGCCTG GAACGATGCC
TTCTCCGCCG GTCGCTGGAT GGAAGTGCAG GCGCTGGCGA AATGGCCGGG CGCGGGTGAG
AGCGCCTACG GCAAAAGGCT GCAATGGTAC GGAATGCGCA CCGCACAAAT CTGCGACATC
TGGGAAGAAG TCTGGGCCGA GGAGGGGGAC CGGGTGATCT GTGTCATGGG AAGCCAGGCC
GCCAATCCCT GGACCGCACG CCAGGCGCTG GACTGTCGAC TGTGGCGGGC CGAACGCGGC
GGCGCGCCCT GCTATCGGCA TCATGTCCGG GCGTTGGCCA TTGCTCCCTA TTTCGGCCAC
TACCTGGGCC TGCCAGAACA TGCGGCAGTG GTAAAGGAAT GGAGCACCGA TCCCGACGGG
GGACTGCACC GACTGTTCAC TGAAATCTTC TACGGCGGCG AGCTTCCGGG CGGCCCGGCC
GGCGGAGCCC TGGAGGAAGC CAAGCGTCAG ATGCAGGAAA ACAAACGCCT TGCCAGCGAG
TATGGGCTGA ACCTGGTGGC CTACGAAGGC GGTCAGCATC TGGTGGGCGT CGGCGAAGCC
GGCACTGATC CGGCGATTAC CGCCCTGTTC GTGGCCGCCA ACCGGGACGA GCGCATGGGT
GAGGCCTACC TTCGCCACCT GGAAGACTGG CGGGCGGCGG GGGGCGGGCT CTACAACCTG
TGGAACAGCG CCGGTCCCTA TACCCGCTGG GGCAGTTGGG GCCTGCTCGA ATACCGGGAC
CAGCCTGGCG CGCCGAAATA CGATGCGGTC AGGGCCGCGA TGCCCCGGGA ATGA
|
|---|
| Protein sequence | MVTRQPPALS LRWVVDGMGG RWLDGIYAAA LCLGLTACDE PDAPTPDSGF GIGVNIAGLA
YYGTEIPFVD LFKLSGPWLT QCRTGRDPGC NGQGWPPGAS AWNTLEQDAL ALDAAGYPKS
LSDPARNDAS GSRFTSVATL VPTDLNPSRP AGRFIVRYQG QGTLGYARGA VRNAVLSRPG
RDVVDVTGTG GEYWFELAIL ATDPGGNGDH LRNIRVVPEG GTCEGRPTAF CTDTQTCGTQ
RACRPFEEAD PIFDPRFLRN LAPFRAIRFM AYQNTNDSTA VGWTDRTVPD SRTWASEGGD
GGPAELIPAL GNRLQADVWV NMPARADDGY VRQFAMLVRR ELDKDRKVYV EYGNEAWNDA
FSAGRWMEVQ ALAKWPGAGE SAYGKRLQWY GMRTAQICDI WEEVWAEEGD RVICVMGSQA
ANPWTARQAL DCRLWRAERG GAPCYRHHVR ALAIAPYFGH YLGLPEHAAV VKEWSTDPDG
GLHRLFTEIF YGGELPGGPA GGALEEAKRQ MQENKRLASE YGLNLVAYEG GQHLVGVGEA
GTDPAITALF VAANRDERMG EAYLRHLEDW RAAGGGLYNL WNSAGPYTRW GSWGLLEYRD
QPGAPKYDAV RAAMPRE
|
|---|
| |