Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1413 |
Symbol | rpsA |
ID | 3104284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1498659 |
End bp | 1500326 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637170588 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_113870 |
Protein GI | 53804257 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0578612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAA GCTTTGCAGA ACTGTTTGAA GAAAGTCTGG CGAAAGCCGA GATGCGCGCG GGCAGCATCA TCACCGGCAC CGTCGTCGAC ATCGGCACCG ATGCGGTCGT CGTCAACGCC GGACTGAAAT CCGAAGGCGT CATTCCGAAG TGGCAATTCC TCAATGCCGA CGGCCAGCTG GAAGTCCAGG TGGGCGATCA GGTCGAGGTC GCTTTGGATA TGGTGGAGGA CGGCCTCGGC GCGACCCTGC TGTCCCGCGA CAAGGCGAAA AAGCTCAAGG CATGGGAAGA CCTGGAGAAA GCTTTCGAGA ACAACGAGAC CGTTGTCGGC CGTATCGTCG GCAAGGTCCG CGGTGGCTTT ACCGTGGCCA TCGGCGCCCT ACGGGCGTTT CTGCCCGGCT CCCTGGTCGA CGTGCGTCCC GTGCGCGACA CCGCTTTCCT GGAAGGAAGG GACCTGGAGT TCAAGGTCAT CAAGATCGAT CAGAAGCGTA ACAACGTGGT GCTGTCGCGC CGTGCCGTGG TCGAATCCGA GTTCAGCGCC GAGAAGGAAG CGCTGATGGA AAGCCTCAAG GAAGGCGCCA TCGTCACCGG CGTGGTCAAG AATCTCACCG ATTATGGCGC ATTCATCGAC CTGGGCGGAA TCGACGGCCT GCTCCACATC ACCGACATGG CCTGGAAGCG CGTGCGTCAC CCGTCCGAAG CCGTCCAGAT CGGCCAGGAG CTGCAGGTCA AAGTGCTCAA GTACGATCAG GAAAAGAACC GCGTGTCACT GGGCCTAAAA CAGCTCGGTG AAGACCCCTG GGTCAACATC GCCCGCCGCT ATCCCGCCGG CACCCGCTTG TTCGGCAAGG TCAGCAACCT CACCGATTAC GGCTGCTTCG TCGAACTGGA AGAGGGCGTC GAGGGTCTGG TCCACGTCTC GGAAATGGAC TGGACCAACA AGAACGTCAA TCCGGCCAAG GTCGTCCAGC TCGGTGAGGA AGTCGAGGTC ATGGTCCTGG ACATCGACGA GGAACGCCGC CGCATCTCCT TGGGCATGAA GCAGTGCAGA CAGAATCCCT GGGACGAGTT CGCTGCGACC CACAAGAAGG GCGAGAAGAT CCGGGGCACG ATCAAATCGA TCACCGATTT CGGTATCTTC ATCGGCCTCG ACGGCAACAT CGACGGCTTG GTGCATCTGT CCGACATTTC CTGGTCGGTG CCCGGCGAGG AAGCCATCCG CCAGTTCAAG AAAGGCGACG AGCTGGAGAC CGTCATCCTG GCGATCGATC CGGAACGCGA GCGCATCTCG CTGGGCATCA AACAGCTCGA ACAGGATCCG TTTCAGAACT TCCTGGCGGC TCACGACAAA GGTTCGATCG TGCGCGGCGT GGTAAAAGAG GTGGATGCCA AAGGCGCGGT CATCACTCTG GCGGACAACG TGGAAGGCTA TCTGCGCGCC TCCGAAATCC AGCGCGACCG GGTCGAAGAC GCGCGGGCAC TGCTGAACGT GGGTGACGAA ATCGAAGCCA AATTCATCGG TGTCGACAAG AAAACCAAGT CGATCTCCCT GTCGATCAAG TCCAAGGATC AGGATGAGGA AGCGGCGGCG ATCAAGGACT ACTCGCAGCA GGTGTCCGGC ACCCCGACCC TCGGCGACAT CTTCAAGGAA CAGATGGAAA ACCGCTGA
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Protein sequence | MGESFAELFE ESLAKAEMRA GSIITGTVVD IGTDAVVVNA GLKSEGVIPK WQFLNADGQL EVQVGDQVEV ALDMVEDGLG ATLLSRDKAK KLKAWEDLEK AFENNETVVG RIVGKVRGGF TVAIGALRAF LPGSLVDVRP VRDTAFLEGR DLEFKVIKID QKRNNVVLSR RAVVESEFSA EKEALMESLK EGAIVTGVVK NLTDYGAFID LGGIDGLLHI TDMAWKRVRH PSEAVQIGQE LQVKVLKYDQ EKNRVSLGLK QLGEDPWVNI ARRYPAGTRL FGKVSNLTDY GCFVELEEGV EGLVHVSEMD WTNKNVNPAK VVQLGEEVEV MVLDIDEERR RISLGMKQCR QNPWDEFAAT HKKGEKIRGT IKSITDFGIF IGLDGNIDGL VHLSDISWSV PGEEAIRQFK KGDELETVIL AIDPERERIS LGIKQLEQDP FQNFLAAHDK GSIVRGVVKE VDAKGAVITL ADNVEGYLRA SEIQRDRVED ARALLNVGDE IEAKFIGVDK KTKSISLSIK SKDQDEEAAA IKDYSQQVSG TPTLGDIFKE QMENR
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