Gene MCA1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1406 
SymbolsgaA 
ID3102625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1492959 
End bp1494146 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID637170582 
Productserine--glyoxylate aminotransferase 
Protein accessionYP_113864 
Protein GI53804270 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.600675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGTC GCAACCATCT TTACGTTCCT GGTCCGACGA ACATTCCGGA TGCCGTTCTC 
AGCGCGATGC ACGTACCGAT GGAGGACCAT CGGCGACCGG ACTTCCCTGC CCTCGTGACC
CCGCTGCTGG AGAATCTGAA AAAGGTATTC CGGACAGAAG CAGGACAGTG CTTCATCTTT
CCGGCCACGG GAACCGCGGG TTGGGAAATT GCTCTCTCGA ATACGCTCTC TCCCGGCGAC
AAAGTGTTGT CCTATCGTTT TGGACAATTC AGTCATCTGT GGATCGACCT GGCCAGACGT
CTGGGCCTCG AAGTGGAGTA CGAGGAGGTG CCGTGGGGTC AGGGGGTGCC GCTGGACAGA
CTGGAGGCGC GCCTGAAAGC CGACACCGCT CATGAAATCA AGGCGGTGCT GATCTGCCAC
AATGAGACTG CAACCGGTGT GACCAACGAC CTTCCGGCCG TACGCAAGGC CATCGATGCG
GCCGGCCACC CTGCCCTGTT CTATGTCGAT GGCGTGAGTT CCATCGGCTC GCTGGATTTC
CGCATGGACG AATGGGGCAT CGATATCGGC GTGGCCGGCT CCCAGAAAGG CTTCATGCTG
CCGGCCGGTC TGGCGCTGCT GGGCTTCAGC CAGAAGGCAC TGAAGGCACG GGAGTCCGCT
AAGTGTAAGC GCGCATTCCT GGACATCAAC GATCACATCC TTCACAACGC TGGCGGTTTT
TTCCCGTATA CCCCATCGAT CCCGCTGCTG TATGGTCTGC GCAAGTCGCT GGAACTGCTG
CTCGAGGAGG GGCTGGAGAA CGTTTACGCC CGCCATGCCC GCTTGGCCGA GGGTGTCCGC
CGGGCGGTGG CTGCCTGGGG GCTCCAGCTC TGCGCCCAGG ATCCGAAATG GTATTCGAAC
ACCGTGTCGG CTGTCGTCGT ACCACCGGAG TTCGATGCGC GCGACGTGAT CCACACGGCT
TATTTCCGCT ATAACCTGTC GCTGGGTGCG GGGCTGAGTG AAGTCTCGGG GAAAGTATTC
CGCATCGGTC ACTTGGGGGA TCTCAACGAA TTGAGCCTGG CCAGCGCCAT CGTGGGTTCG
GAAATGGCCA TGCTGGACGT GGGTATTCCC TTGACGCCGG GCAGCGGCAT CGCGGCGGCC
AGCGCCCATT GGCGCGAGAC CGCTCCGGTA ATCCAGCCCC GAGTCTGA
 
Protein sequence
MPGRNHLYVP GPTNIPDAVL SAMHVPMEDH RRPDFPALVT PLLENLKKVF RTEAGQCFIF 
PATGTAGWEI ALSNTLSPGD KVLSYRFGQF SHLWIDLARR LGLEVEYEEV PWGQGVPLDR
LEARLKADTA HEIKAVLICH NETATGVTND LPAVRKAIDA AGHPALFYVD GVSSIGSLDF
RMDEWGIDIG VAGSQKGFML PAGLALLGFS QKALKARESA KCKRAFLDIN DHILHNAGGF
FPYTPSIPLL YGLRKSLELL LEEGLENVYA RHARLAEGVR RAVAAWGLQL CAQDPKWYSN
TVSAVVVPPE FDARDVIHTA YFRYNLSLGA GLSEVSGKVF RIGHLGDLNE LSLASAIVGS
EMAMLDVGIP LTPGSGIAAA SAHWRETAPV IQPRV