| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1360 |
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| Symbol | |
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| ID | 3102689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1446164 |
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| End bp | 1449328 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637170538 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_113821 |
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| Protein GI | 53804522 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.103096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCCA AGTTCTTCAT CGAACGGCCG ATCTTCGCCA ACGTCATCGC GATCGTCACG
ATCATTCTGG GCGCCGTCAG CCTCATCAAT TTGCCGGTCG CCCAGTATCC CGACATCGTG
CCCCCCACCA TCCAGGTAAC CACCCGCTAT CCCGGGGCCA GCGCCGAGAT CATCGCCAAT
ACGGTCGGCA TACCGATCGA ACAGGCGGTC AACGGCGTGG AGAACTCGCT GTACCTGTCC
TCGACCAGCG GCAGCGACGG CTCCTATACC TTGACCGTGA CTTTCCGGGT CGGCAGCGAT
CTCAACACCG GCCTGGCCCT GGTGCAGAAC ATGGTCAACG GGGCCTTGGC CCAGCTGCCG
GATGCGGTGC AGAAACAGGG CGTCACCGTC AAGAAAGTGT CGACCGACAT GCTGCAGGTC
ATCAGCCTGT ATTCGGACGA CGACCGCTTC GACGAAACCT ATCTTTCCAA TTACGCCGTC
ATCAACCTGC AGTATCCGTT GGCCCGCATC CATGGCGTCG GACAGATCAA GGTCGTCGGC
GCCGGCTCCT ACAGCATGCG GGTATGGCTG AATCCGGAGA GGCTGCGCTA CTACGGCCTC
ACCGCCAAGG ATGTCGCCGA CGCGATACAG CAGCAGAACG TCGAGGTCGT GGCGGGCCAA
CTCGGCGGCC CCCCGGTGCC CGAGGACCAA CCCTACCAGT TCACCATCAA CGCCCTGGGC
CGTTTGTCCG ATGTCTCGGA ATTCGAGAAC ATCATCATCA AGACGAGCCG GGGAAAACCG
CAGCAGTCGG TCACGAACGA AGATGCAGCC CGGATCGTGC GCGTGAAGGA CCTCGCCCGA
GTCGAACTGA GCCAACAGAC GTACACCAAC TACGCCGAGG TCAACGGCCA CAAATCGACC
CAGATCGTGG TCTACACCCT GCCCGGAGCC AACGCCATCG ACGTCGGCGA AAGAATCAAA
CAGTCGATGG AGGAAATGAG CCAGGACTTC CCCCAAGGGC TCAAATACGC GATCTTCTAC
GACACCACCA AATTCATCGA CCAGTCGATC CACGCGGTCT ACGAGACCCT GTTCGAAGCC
GGCGTGCTGG TGCTGATCGT CATCATGGTG TTCCTGCAGA ACTGGCGGGC GACCCTGGTG
CCGGCCACGA CCGTCCCGGT GACCATCATC GGCGCCTTCG CCGCGATGGC GATGCTCGGC
TTCTCGGTCA ACCTGATGAC ATTGTTCGCC TTGATCCTGG CGATCGGCAT CGTCGTGGAC
GATGCCATCA TGATCGTCGA GAACGCCTGG CACTACATCG AGAAGGGACT GACGCCGAAG
GAGGCGTCGA TCAAGGCCAT GAGCGAGATG ACCGGCCCGG TCATCGGCAT CACCCTGGTG
CTGACTGCGG TATTCCTGCC TTCGGCCTTC CTGCCCGGCA TTACCGGCCA GATGTTCCGG
CAATTCGCCC TTGTGATCGC CTCTACCGCG ATCATCAGCG CCATCAACGC CTTGACCCTC
AAACCGGCTC AGTGCGCCCT CTACCTCAAG GCACGGCCGG CCGATCACCG TCCGAACGCA
TTCTACCGCG GCTTCAACGA AGTCTATGCC GCAATCGAGG CAGCCTATAC CCGAGTGGTC
CGCTGGATGG TGAAAAGGGC CGGAACGATG GCCGTGGTTT TCTTCGCCTT CATCGCCATG
GGCGGCTGGC TGTTCAGCAT CCACCCGACA GGCTTCCTGC CCAGCGAGGA TCAGGGCTAC
GCCATAATCA TGACACGCCT GCCGGACGGC GCCGCCCAGC CCAGACTCCG GGAAGCCAGC
CGTAGGCTCG ACGAAGTCCT GAAAAAAACG CCCGGCGTGC ATGCCTGGGT CGTGATCGGG
GGGTTGTCGA TCCTCGATAC CGCCAACCTC TCGAACGCTT CCACCACCTT CGTCATTTAT
GACGACTGGG ACAAGCGCGG CGAAGCGCTC GATCAGCGCC ATATTCTCGG CAGCCTGAAA
AAGCAGCTCG ACGCCATTCC GGAAGCCCAG TTCGCCATCA TGATTCCGCC GCCCATCCGC
GGCCTCGGCC AGGCCGGCGG CTTCCAGATG ATGGTCGAAG ACAGGCGCAG CCTCGGCCTG
CCCGAATTGC AGAAGGGCGT GCAGGAACTG ACCCGCGCCG GGTCCACGCA ATCCGGTCTC
GGCTTCGTGG GTTCGACCTT CAGCAACCGC AGCCCTCAGC TTTACCTCGA CATCGACCGC
ACCAAGGCGC AGTCGCAGGA AGTTCCGCTG AGCAACGTAT TCGCCACCCT GCAAGCGTAT
CTCGGATCCG CTTACGTCAA TCTGTTCAAT AAATTCAATC AGTCGTTCCA GGTTTACGTG
CAGGCCGACG CACCCTACCG GCTGCGGCCG GAGGACATCG AGAATCTCTA CGTGAAGAAC
GTCCGGGAGG AAATGGTCCC GCTGGGCTCC CTCCTGACCG TGAAGCACAT GCTGGGTTCC
GAACTGGTCA CCCGTTACAA CCTCTATCCG GCAGCGCCGG TGTTCGGATC CGCGGCGCCG
GGGTCCAGTT CCGGTGAAGC GATCCAGCTG ATGGAGCGGA TCGCCAAGAA CACCTTGCCG
CAAGGCATGA GCTTCGAATG GACCGCCACC GCATTCCAGG AAAAGCAGCT CGGCAACCAG
GCGTACTACA TCTATCTTCT GTCCATCGTT CTGGTTTTCC TGGTGCTGGC CGCTCAATAC
GAAAGCTGGG CCAGCCCCGC CGCGGTGATC CTGGTCGTAC CCATGGCTCT GGTGGGCGTC
ATCGTCGCCC TCATCATCCG CCACTTCGAC AACAACCTGT ACACCCAGGT CGGCCTGGTA
CTGATGATCG CGCTGGCCAG CAAGAACGCC ATCCTGGTGG TGGAATTCGC CCGGGAACTG
CGCACCGAAG GCATGGCCAT CGCCGACGCC GCGGTGGAAG CCACCCGGCG CCGGTTCCGG
CCCATCATCA TGACCTCGTT CGCTTTCATC CTGGGTGTCG TCCCGCTGAT GAAGGCCGGC
GGCGCCGGCG CGGCCAGCCA GCAGGCGATC GGCACCGTGG TGTTCGGCGG CATGCTGGCC
TCGACCATCC TGGCCATCCC CTTCGTACCG GTGTTCTATG TCATCACCCA GCGCTGGAGC
GAGCGGAACA AGGGAGGCAA ACCGGAATCT CCGGCGACCG GCTGA
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| Protein sequence | MISKFFIERP IFANVIAIVT IILGAVSLIN LPVAQYPDIV PPTIQVTTRY PGASAEIIAN
TVGIPIEQAV NGVENSLYLS STSGSDGSYT LTVTFRVGSD LNTGLALVQN MVNGALAQLP
DAVQKQGVTV KKVSTDMLQV ISLYSDDDRF DETYLSNYAV INLQYPLARI HGVGQIKVVG
AGSYSMRVWL NPERLRYYGL TAKDVADAIQ QQNVEVVAGQ LGGPPVPEDQ PYQFTINALG
RLSDVSEFEN IIIKTSRGKP QQSVTNEDAA RIVRVKDLAR VELSQQTYTN YAEVNGHKST
QIVVYTLPGA NAIDVGERIK QSMEEMSQDF PQGLKYAIFY DTTKFIDQSI HAVYETLFEA
GVLVLIVIMV FLQNWRATLV PATTVPVTII GAFAAMAMLG FSVNLMTLFA LILAIGIVVD
DAIMIVENAW HYIEKGLTPK EASIKAMSEM TGPVIGITLV LTAVFLPSAF LPGITGQMFR
QFALVIASTA IISAINALTL KPAQCALYLK ARPADHRPNA FYRGFNEVYA AIEAAYTRVV
RWMVKRAGTM AVVFFAFIAM GGWLFSIHPT GFLPSEDQGY AIIMTRLPDG AAQPRLREAS
RRLDEVLKKT PGVHAWVVIG GLSILDTANL SNASTTFVIY DDWDKRGEAL DQRHILGSLK
KQLDAIPEAQ FAIMIPPPIR GLGQAGGFQM MVEDRRSLGL PELQKGVQEL TRAGSTQSGL
GFVGSTFSNR SPQLYLDIDR TKAQSQEVPL SNVFATLQAY LGSAYVNLFN KFNQSFQVYV
QADAPYRLRP EDIENLYVKN VREEMVPLGS LLTVKHMLGS ELVTRYNLYP AAPVFGSAAP
GSSSGEAIQL MERIAKNTLP QGMSFEWTAT AFQEKQLGNQ AYYIYLLSIV LVFLVLAAQY
ESWASPAAVI LVVPMALVGV IVALIIRHFD NNLYTQVGLV LMIALASKNA ILVVEFAREL
RTEGMAIADA AVEATRRRFR PIIMTSFAFI LGVVPLMKAG GAGAASQQAI GTVVFGGMLA
STILAIPFVP VFYVITQRWS ERNKGGKPES PATG
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