Gene MCA1357 details

Gene Information

• Locus tag: MCA1357
• Symbol: nuoCD
• ID: 3104978
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1443128
• End bp: 1444891
• Gene Length: 1764 bp
• Protein Length: 587 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637170535
• Product: bifunctional NADH:ubiquinone oxidoreductase subunit C/D
• Protein accession: YP_113818
• Protein GI: 53804525
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7; [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C; [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCCC CGACGACGGA ACATGCCGAA ACCATCGTCC CGGCCCTGTG CCGGCGCTTC 
GGCGGCGAGA CCTTCGTCCA GCAGACCACC GCTGACGGCA TTTCCACCCT GTGGCTGCCC 
GCCCGAATCC TCGTGGAGAC GATCCGCTAC CTCCGTTCGG AAATCGACCG CCCCTATGCC 
CTGCTGTTCG ACCTGACCGC CGTCGATGAA CGGGTCCGGA AGCACCGTGA CGGCATGCCG 
GCAAGCGCCT ACACGGTCGT CTATCACCTC GTCTCGCTGG AGCGCAACGC CGATGTCCGG 
CTGAAAATCG CCTTGCCGGA GACCGATCCG GCGCTCCCCA GCATCGTTGC CGTCTGCCCC 
GCCGCCAACT GGTACGAGCG CGAAGTCTGG GACATGTTCG GCATCCGTTT CGACGGGCAT 
CCCAACCTGC GCCGCCTCAT CATGCCGCCG ACCTGGCAGG GCCATCCCTT GCGCAAGGAT 
CATCCGGCCC GGGCCACCGA GATGGAACCG TTCAGCCTGC CGGACGATGT GCAACAGCAG 
GAGCAGGAAG CCCTGCGCTT CGTGCCCGAG GAATGGGGCA TGCAGCGCCA GAGCGAGGAC 
ACCGACTTCC TGTTCCTGAA CCTGGGCCCC AATCACCCCA GCGTGCACGG TGTGTTCCGC 
GTCGCCCTCC AGCTCGACGG CGAGGAGATC GTCGATGCCG TGCCCGACAT CGGTTATCAC 
CACCGGGGCG CGGAAAAGAT GGGGGAACGC CAGTCCTGGC ACAGCTACAT CCCCTACACC 
GACCGGATCG ATTACCTGGG CGGTTCGATG AACAACCTGC CTTACGTCAT GGCGGTGGAG 
AAGCTGGCCG GAATCGAGGT GCCGGAGCGC GCCCGGGTCA TCCGCGTCAT GATTTCCGAG 
TTCTACCGGA TCGCCAGCCA CCTGCTGTTC TACGGGACGT TCGCCCAGGA CGTGGGCCAG 
ATGTCGCCGA TTTTCTACAT GTTCATCGAC CGCGAGAGGG TGTTCGAGAT CATCGAATCG 
TTTACCGGCG CCCGGATGCA CTCCAGCTTC TTCCGCATCG GCGGGGTGGC CATGGACCTC 
CCCGAGGGCT GGGACAGACT GATCCGTGAA TTCATCGCCT ATTTTCCCAG GCGTCTGGCC 
GAATACGACA AGGCGGTGAT GGCCAACAAG CTGATCCAGC GCCGCACCCG CGGGATCGGC 
GCCTACACCA CGACCGAGGC CATCGACTGG AGCGTGACCG GCGCGGGACT GCGGGCCACG 
GGGCTGCCCT GGGACTACCG CAAGGCACGG CCCTATTCGG GTTACGAGAA CTTCGAATTC 
GACGTTCCTA CCGGCACGAA CGGCGACTGC TACGACCGTT GCGCGGTGCG GGTGGAAGAG 
ATGCGGCAGA GCCTCCGGAT CATCGAGCAG TGTGTGGAGC ACATGCCTTC CGGCCCTTAC 
AAAGCCGAGC ACCCGCTCAC CACCCCACCG CCCAAGGAAC GCACGATGCA CGACATCGAG 
ACGCTGATCC AGCATTTCCT CAGCGTCTCC TGGGGCCCGG TGATCCCGCC GGGCGAGGTC 
TGCGTGACGA TCGAGGCGAC CAAGGGCCTG AACGGCTATT ACCTGACCTC GGACGGCGGC 
ACCATGTCCT ACCGTACCCG CATCCGCACC CCCTCGTTCC CGCATCTGCA GATGATCCCG 
CTGATGAGCC GGGGCATGAT GGTCGCCGAC CTGATCGCCA TCCTCGCCAG CATCGATTTC 
GTGATGGCCG ATGTGGACCG CTGA 

 

Protein sequence

MAAPTTEHAE TIVPALCRRF GGETFVQQTT ADGISTLWLP ARILVETIRY LRSEIDRPYA 
LLFDLTAVDE RVRKHRDGMP ASAYTVVYHL VSLERNADVR LKIALPETDP ALPSIVAVCP 
AANWYEREVW DMFGIRFDGH PNLRRLIMPP TWQGHPLRKD HPARATEMEP FSLPDDVQQQ 
EQEALRFVPE EWGMQRQSED TDFLFLNLGP NHPSVHGVFR VALQLDGEEI VDAVPDIGYH 
HRGAEKMGER QSWHSYIPYT DRIDYLGGSM NNLPYVMAVE KLAGIEVPER ARVIRVMISE 
FYRIASHLLF YGTFAQDVGQ MSPIFYMFID RERVFEIIES FTGARMHSSF FRIGGVAMDL 
PEGWDRLIRE FIAYFPRRLA EYDKAVMANK LIQRRTRGIG AYTTTEAIDW SVTGAGLRAT 
GLPWDYRKAR PYSGYENFEF DVPTGTNGDC YDRCAVRVEE MRQSLRIIEQ CVEHMPSGPY 
KAEHPLTTPP PKERTMHDIE TLIQHFLSVS WGPVIPPGEV CVTIEATKGL NGYYLTSDGG 
TMSYRTRIRT PSFPHLQMIP LMSRGMMVAD LIAILASIDF VMADVDR