| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1319 |
|---|
| Symbol | |
|---|
| ID | 3103833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1409473 |
|---|
| End bp | 1410462 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637170497 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_113781 |
|---|
| Protein GI | 53804592 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAATA GGGCGCCCTC CGACTGGCGT CCATCCTGCC CGCCGGCCAT GCTGCGCCGG
CGGGCGGAAC TCCTTCGGAA AATCCGACGG TTCTTCGCCG AACGGGAGGT GCTGGAGGTC
GAGACTCCCC TTCTCTCGCA CGGTACCGTG ACCGATCCGC ACCTGAGCGT TTTTTCCGTC
GGTGGCGGCA GCGACGGTTC GTCACGGCTG TTCCTCCAGA CCTCGCCGGA ATTCGCGATG
AAGCGGCTGC TGGCCGCCGG CAGCGGTTCG ATCTATCAGA TCTGCAAGGC CTTCCGCAGG
GATGAATCCG GCCGCTTCCA CAACCCCGAG TTCACTCTCC TGGAATGGTA CAGGGTCGGT
TTCGGGCTCG ACGAATTGAT CGAAGAAACC GATGCGCTGT TGCAGGTCCT GAGTGAAAAC
ATCCGTCCGC TGGCCCCGTC CGAACACCTG AGCTACCGCG AGTCCTTCCT GAGGCATGCC
GGCATCGATC CGCTCGACGC CGGGTTCGCC GATTTCGCCG GCTGTGCTGC GAGCCACGGC
TTGCAGGAAG CCGAAGCAAT CTGCGGAACG GACCGTTCGA TCTGGCTCGA CCTGCTGTTC
AGCCACCTCG TCCAGCCCCA TCTGGGGCGG GGCCGTTTCA CGTTCGTGCG CGATTTTCCC
GCGATCCTGC CATCCCTGGC CAGGTTCAAA CCGGACGACG AGCGGTTGGT GGAGCGGGTG
GAGGTATTCC TGGACGGTCT GGAGCTGGGC AACGGTTTTT TCGAGCTCAG CGACCCCCTC
GAACAGGAAT ACCGGTTCGA CCGTGACATC GCTGCCCGCA TCGACGCCGG GCTTCCCGTT
CCGGAAAAAG ACCGGCGTCT CCTGGATGCT CTGAAAGCCG GTCTGCCCGA CTGCGCCGGG
ATCGCCCTCG GCATCGACCG GCTGCTGCTC GGCCTCCACC GGCTGGACGC GATCGCCGAT
ACCCTGGCCT TCCCCCTGGC CAAGGCCTGA
|
|---|
| Protein sequence | MSNRAPSDWR PSCPPAMLRR RAELLRKIRR FFAEREVLEV ETPLLSHGTV TDPHLSVFSV
GGGSDGSSRL FLQTSPEFAM KRLLAAGSGS IYQICKAFRR DESGRFHNPE FTLLEWYRVG
FGLDELIEET DALLQVLSEN IRPLAPSEHL SYRESFLRHA GIDPLDAGFA DFAGCAASHG
LQEAEAICGT DRSIWLDLLF SHLVQPHLGR GRFTFVRDFP AILPSLARFK PDDERLVERV
EVFLDGLELG NGFFELSDPL EQEYRFDRDI AARIDAGLPV PEKDRRLLDA LKAGLPDCAG
IALGIDRLLL GLHRLDAIAD TLAFPLAKA
|
|---|
| |