Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1316 |
Symbol | nusA |
ID | 3102698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1406517 |
End bp | 1408016 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637170494 |
Product | transcription elongation factor NusA |
Protein accession | YP_113778 |
Protein GI | 53804603 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATA AAGAAATCCT GCTGGTAGTC GACGTGGTGT CGAACGAAAA GGACATCGAA AAAGAAGTCA TCTTTTCCGC GATCGAAGAG GCGCTCCGCA CCGCCACGAT CAAGCGGCAT GACGGCAGGT ACGATGTGCG CGTGAGTATC GACCGCAAGA CCGGCGACTA CGAAACCTTC CGCCGCTGGC AGGTGGTGGA ACCCCGGGAG GAATTCGGCA ACGGTGTCGA ATTCCCGGAA AGAGAGATAT CCCTCGAAGA AGCGCGCAAG ACTCACCCCG GCATCACCGT CGGCGAGTTC GTAGAAGAAC CCTTCGACTC CATCGAGTTC GGCCGCATCG CCGCGCAGAC CGCCAAGCAG GTGATCGTGC AGAAAGTGCG CGAGGCCGAA CGGCGCAAGA TCGCGGACGC CTATCAGAGC CGCGTCGGCG AGCTGGTCAC CGGCGTCATC AAGCGCATCG AGCGGGGCAA TGTCTTCCTC GACCTCGGCG GCAACGTCGA GGCCTTCATC CCTCGTGACG AGATGATCCC GCGCGAATCC GTCCGTTCCG GGGACCGCCT GCGCGGCATC CTCAGCGCGG TCCGGCCGGA TGCCAGGGGG CCGCAGCTTT TCGTCAGCCG CACCGCGCCG GAACTCCTGA TCGCGCTATT CCGGCTGGAA GTCCCCGAGG TCAGTGAAAA CCTCATCGAA ATCAAGGGAG CAGCCCGCGA TCCCGGAGTA CGCGCCAAAG TGGCGGTCAA GAGCAACGAC CCCCGCCTCG ACCCGGTCGG CGCCTGCGTC GGCATGCGCG GCTCGCGGGT CCAAGCCGTG TCCAACGAAC TGGCGGGAGA ACGCATCGAC ATCATCCTGT GGAACGAGAA CGAGGCCCAG TTCGTGGTCA ACGCCATGTC GCCAGCCGAA ATCGTTTCCA TCGTCGTGGA CGAAGACCGC CACAGCATGG ATATTGCCGT CGCCGACGAA AACCTGTCGC AGGCCATCGG CCGCGGCGGT CAGAACGTGC GGCTGGCGTC CGAGCTTACC GGCTGGACGC TTAACGTCAT GAGTTCCACC CAGGCCGACG CCAAGACCCA GGAAGAAACC CGGCGTCTGA TCCAAACCTT CGTCGAACAA CTCGGCGTCG ATGGGGAGGT CGCGGAAATC CTCGTCCGGG AAGGCTTCTC CAGCGTGGAA GAACTCGCCT ACGTACCGAC CAAGGAATTG CTCGAAATCG AGGAATTCGA CGAGGATATC GTGGAAGAAT TGCGTAACCG GGCACGGGAT GCGCTGCTCA TCAAGGCCAT CGCATCCGAG GAGAAACTCG AAGAGGTCGA GCCCAGCGAG GATCTGCTGG AGCTCGAAGG CATGGATCGC GAATTGGCCT ATCGCCTCGC GCGCCATGGC ATTCGCACGC TGGAAGACTT GGCCGACCAG GCCGTCCCGG ATCTTTTGGA CATCGAAGAC ATGGAAGAGG AAAAGGCCGC TGAACTCATC ATGAAGGCGC GCGCCTCGTG GTTTTCCTGA
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Protein sequence | MANKEILLVV DVVSNEKDIE KEVIFSAIEE ALRTATIKRH DGRYDVRVSI DRKTGDYETF RRWQVVEPRE EFGNGVEFPE REISLEEARK THPGITVGEF VEEPFDSIEF GRIAAQTAKQ VIVQKVREAE RRKIADAYQS RVGELVTGVI KRIERGNVFL DLGGNVEAFI PRDEMIPRES VRSGDRLRGI LSAVRPDARG PQLFVSRTAP ELLIALFRLE VPEVSENLIE IKGAARDPGV RAKVAVKSND PRLDPVGACV GMRGSRVQAV SNELAGERID IILWNENEAQ FVVNAMSPAE IVSIVVDEDR HSMDIAVADE NLSQAIGRGG QNVRLASELT GWTLNVMSST QADAKTQEET RRLIQTFVEQ LGVDGEVAEI LVREGFSSVE ELAYVPTKEL LEIEEFDEDI VEELRNRARD ALLIKAIASE EKLEEVEPSE DLLELEGMDR ELAYRLARHG IRTLEDLADQ AVPDLLDIED MEEEKAAELI MKARASWFS
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