Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1309 |
Symbol | pnp |
ID | 3102997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1398752 |
End bp | 1400827 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170487 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_113771 |
Protein GI | 53804618 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCCGA TCCGGAAGCA ATTTCAGTAC GGCGCTCATA CCGTTTCGTT CGAAACCGGC GAGATCGCCC GTCAGGCCGA TGCCGCGGTC ATGGTGGACA TGGCGGGCAC CGTGGTGCTG GTCACCGTGG TGGGGCGCAA GGATGCCTCC CCGCACGGCG ATTTCTTTCC CCTTACCGTC AATTACCAGG AAAAGGCCTA CGCTGCCGGA CGCATTCCGG GCGGATTCTT CAAGCGGGAG GGACGTCCCA GCGAAAAAGA AACGCTGACT GCGCGACTGA TCGACCGGCC CATCCGACCG CTGTTCCCGG ACGGCTTCAC CCACGAAGTC CAGGTCGTTG CCACCGTCAT GTCGCTGAAT CCGGAAGTCG ACCCCGATAT CCCGTCGATG CTGGGCGCGT CAGCGGCACT GACGCTATCG GGCCTGCCTT TCAAAGGTCC GATCGGTGCC GCCCGGGTGG GATTCGTGAA CGGCGCCTAC GTCCTGAATC CGGACGGCTC GGTCGTGGAG GGATCGGAGC TCGACCTGGT GGTCGCGGGA ACCGCCAACG CGGTGCTCAT GGTCGAATCG GAGGCGAAAA TCCTGCCCGA GGAAGTGATG CTGGGGGCGG TCGTGTTCGG CCATGAACAG ATGCAGACGG CCATCCGTGC CATCAACGAG CTGGCGGAGG AAGTCGGCGT GACCCCCTGG CCGTGGGAAC CGTCGGCCGT CGACGCCGCC CTGGTCGCCG CGGTCGACGA ACTGGCCCGG GCGGGACTGG GCGAAGGCTA CAACATCGCC GACAAGCAGC TCCGTCAGCA GAAGCTCAAA GAAGTCCGGA AGGCCGTGAT CGACGCCCTC ACCGCCGAAG GCGCTCACGA CGAAAACGCG GTCAAGCGAC AGATCGAGAA ACTGGAAGAG GAAATCGTCC GGAGCAACAT CCTCCACCAC GGAAAACGGA TCGACGGGCG TGACCTTTCC ACGGTGCGCC CCATCACGAT CCGTACCGGC GTCCTGCCCC GTACCCACGG CTCCGCCCTG TTCACCCGCG GCGAAACTCA GGCGCTGGTG GTCGCAACGC TGGGCACGGG CCGCGATGCG CAGCTCATCG ACGCCCTGGA AGGCGAGTAC AAAGAGAATT TCATGCTGCA CTACAACTTT CCCCCCTATT GTGTGGGAGA GACCGGCGCC ATCGGCTCGC CCAAAAGGCG CGAAATCGGC CACGGGCGCC TAGCCAAGCG CGGCGTGCAG GCGATCATGC CGACGATGGA CGAATTCCCC TATGTCATCC GCATCGTCTC GGAGATCACC GAATCCAATG GCTCCAGCTC CATGGCATCG GTCTGCGGCA GCAGCCTGGC GTTGATGGAT GCGGGGGTGC CGACCAAAGG CGCCGTGGCC GGTATCGCCA TGGGGTTGAT CCTCGAAGGC GAAGAATTCG CCGTCCTGTC GGACATCATG GGTGACGAGG ACCACCTGGG CGACATGGAC TTCAAGGTCG CCGGCACCCG CGACGGTGTC ACCGCGCTGC AGATGGACAT CAAGATCGAC GGCATCACGC CGGAAATCAT GCGCCAAGCG TTGCATCAGG CCCGCGAGGG ACGGATGCAC ATCCTGGACA AGATGGCGCA GGCGCTGCCG GCCCCGCGCA GCGAAATGTC CGATTACGCG CCGCGCATCA CCAGCTTCAC CATCGACCCC AGCAAGATCC GGGAAGTGAT CGGCAAAGGC GGTGCGACCA TCCGCGCCAT CACCGAAGAA ACCGGCACCA GCATCGACAT CAGCGACGAT GGTGTCGTCA AGATCGCCTC GGTCGACAAA CAGGCTGGTC TGGAGGCCCG CCGCCGTATC GAGGACATCA CGGCGGAGGT CGAGGTCGGT AAAGTCTACG AGGGCAAGGT CGCGAGGCTG ATGGACTTCG GCGCCTTCGT CACCATCCTG CCCGGTAAGG ATGGCTTGGT GCACATCTCC CAGATCTCCG ACGAGCACGT CGAGAAGGTC AGCGACAAGC TGGCGGAGGG GGACATGGTC AAAGTCAAGG TGCTGGAGAT CGACCGCCAG GGCCGGGTGC GCTTGAGCAT GAAGGCCGTC GAGTAA
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Protein sequence | MNPIRKQFQY GAHTVSFETG EIARQADAAV MVDMAGTVVL VTVVGRKDAS PHGDFFPLTV NYQEKAYAAG RIPGGFFKRE GRPSEKETLT ARLIDRPIRP LFPDGFTHEV QVVATVMSLN PEVDPDIPSM LGASAALTLS GLPFKGPIGA ARVGFVNGAY VLNPDGSVVE GSELDLVVAG TANAVLMVES EAKILPEEVM LGAVVFGHEQ MQTAIRAINE LAEEVGVTPW PWEPSAVDAA LVAAVDELAR AGLGEGYNIA DKQLRQQKLK EVRKAVIDAL TAEGAHDENA VKRQIEKLEE EIVRSNILHH GKRIDGRDLS TVRPITIRTG VLPRTHGSAL FTRGETQALV VATLGTGRDA QLIDALEGEY KENFMLHYNF PPYCVGETGA IGSPKRREIG HGRLAKRGVQ AIMPTMDEFP YVIRIVSEIT ESNGSSSMAS VCGSSLALMD AGVPTKGAVA GIAMGLILEG EEFAVLSDIM GDEDHLGDMD FKVAGTRDGV TALQMDIKID GITPEIMRQA LHQAREGRMH ILDKMAQALP APRSEMSDYA PRITSFTIDP SKIREVIGKG GATIRAITEE TGTSIDISDD GVVKIASVDK QAGLEARRRI EDITAEVEVG KVYEGKVARL MDFGAFVTIL PGKDGLVHIS QISDEHVEKV SDKLAEGDMV KVKVLEIDRQ GRVRLSMKAV E
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